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 | 2012 | |
|---|---|---|
| j13 |      | Andreas Wilke, Travis Harrison, Jared Wilkening, Dawn Field, Elizabeth M. Glass, Nikos Kyrpides, Konstantinos Mavrommatis, Folker Meyer: The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools. BMC Bioinformatics 13: 141 (2012) |
| j12 | | William L. Trimble, Kevin P. Keegan, Mark D'Souza, Andreas Wilke, Jared Wilkening, Jack A. Gilbert, Folker Meyer: Short-read reading-frame predictors are not created equal: sequence error causes loss of signal. BMC Bioinformatics 13: 183 (2012) |
| j11 | | Kevin P. Keegan, William L. Trimble, Jared Wilkening, Andreas Wilke, Travis Harrison, Mark D'Souza, Folker Meyer: A Platform-Independent Method for Detecting Errors in Metagenomic Sequencing Data: DRISEE. PLoS Computational Biology 8(6) (2012) |
| 2011 | ||
| j10 | | Suparna Mitra, Paul Rupek, Daniel C. Richter, Tim Urich, Jack A. Gilbert, Folker Meyer, Andreas Wilke, Daniel H. Huson: Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG. BMC Bioinformatics 12(S-1): S21 (2011) |
| j9 | | Andreas Wilke, Jared Wilkening, Elizabeth M. Glass, Narayan Desai, Folker Meyer: An experience report: porting the MG-RAST rapid metagenomics analysis pipeline to the cloud. Concurrency and Computation: Practice and Experience 23(17): 2250-2257 (2011) |
| c6 |  | Peter E. Larsen, Frank Collart, Folker Meyer, Jack A. Gilbert: Predicted Relative Metabolomic Turnover - Predicting Changes in the Environmental Metabolome from the Metagenome. BIOINFORMATICS 2011: 337-345 |
| c5 | | Folker Meyer, Nikos Kyrpides: Proposal for Open Discussion - Informatics Challenges for Next Generation Sequencing Metagenomics Experiments. BIOINFORMATICS 2011: 363-366 |
| 2009 | ||
| j8 | | Florent E. Angly, Dana Willner, Alejandra Prieto-Davó, Robert A. Edwards, Robert Schmieder, Rebecca Vega-Thurber, Dionysios A. Antonopoulos, Katie Barott, Matthew T. Cottrell, Christelle Desnues, Elizabeth A. Dinsdale, Mike Furlan, Matthew Haynes, Matthew R. Henn, Yongfei Hu, David L. Kirchman, Tracey McDole, John D. McPherson, Folker Meyer, R. Michael Miller, Egbert Mundt, Robert K. Naviaux, Beltran Rodriguez-Mueller, Rick Stevens, Linda Wegley, Lixin Zhang, Baoli Zhu, Forest Rohwer: The GAAS Metagenomic Tool and Its Estimations of Viral and Microbial Average Genome Size in Four Major Biomes. PLoS Computational Biology 5(12) (2009) |
| c4 | | Jared Wilkening, Andreas Wilke, Narayan Desai, Folker Meyer: Using clouds for metagenomics: A case study. CLUSTER 2009: 1-6 |
| 2008 | ||
| j7 | | Folker Meyer, Daniel Paarmann, Mark D'Souza, Robert Olson, Elizabeth M. Glass, Michael Kubal, Tobias Paczian, Alexis A. Rodriguez, Rick Stevens, Andreas Wilke, Jared Wilkening, Robert A. Edwards: The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes. BMC Bioinformatics 9 (2008) |
| 2007 | ||
| j6 | | Leslie Klis McNeil, Claudia Reich, Ramy K. Aziz, Daniela Bartels, Matthew Cohoon, Terry Disz, Robert A. Edwards, Svetlana Gerdes, Kaitlyn Hwang, Michael Kubal, Gohar Rem Margaryan, Folker Meyer, William Mihalo, Gary J. Olsen, Robert Olson, Andrei Osterman, Daniel Paarmann, Tobias Paczian, Bruce D. Parrello, Gordon D. Pusch, Dmitry A. Rodionov, Xinghua Shi, Olga Vassieva, Veronika Vonstein, Olga Zagnitko, Fangfang Xia, Jenifer Zinner, Ross A. Overbeek, Rick Stevens: The National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation. Nucleic Acids Research 35(Database-Issue): 347-353 (2007) |
| 2006 | ||
| c3 | | Lutz Krause, Naryttza N. Diaz, Daniela Bartels, Robert A. Edwards, Alfred Pühler, Forest Rohwer, Folker Meyer, Jens Stoye: Finding novel genes in bacterial communities isolated from the environment. ISMB (Supplement of Bioinformatics) 2006: 281-289 |
| 2005 | ||
| j5 | | Daniela Bartels, Sebastian Kespohl, Stefan P. Albaum, Tanja Drüke, Alexander Goesmann, Julia Herold, Olaf Kaiser, Alfred Pühler, Friedhelm Pfeiffer, Günter Raddatz, Jens Stoye, Folker Meyer, Stephan C. Schuster: BACCardI-a tool for the validation of genomic assemblies, assisting genome finishing and intergenome comparison. Bioinformatics 21(7): 853-859 (2005) |
| j4 | | Alexander Goesmann, Burkhard Linke, Daniela Bartels, Michael Dondrup, Lutz Krause, Heiko Neuweger, Sebastian Oehm, Tobias Paczian, Andreas Wilke, Folker Meyer: BRIGEP - the BRIDGE-based genome-transcriptome-proteome browser. Nucleic Acids Research 33(Web-Server-Issue): 710-716 (2005) |
| 2004 | ||
| j3 | | Alice Carolyn McHardy, Alexander Goesmann, Alfred Pühler, Folker Meyer: Development of joint application strategies for two microbial gene finders. Bioinformatics 20(10): 1622-1631 (2004) |
| 2002 | ||
| j2 | | Alexander Goesmann, Martin Haubrock, Folker Meyer, Jörn Kalinowski, Robert Giegerich: PathFinder: reconstruction and dynamic visualization of metabolic pathways. Bioinformatics 18(1): 124-129 (2002) |
| 1998 | ||
| j1 | | Jens Stoye, Dirk Evers, Folker Meyer: Rose: generating sequence families. Bioinformatics 14(2): 157-163 (1998) |
| 1997 | ||
| c2 | | Jens Stoye, Dirk Evers, Folker Meyer: Generating Benchmarks for Multiple Sequence Alignments and Phylogenic Reconstructions. ISMB 1997: 303-306 |
| 1996 | ||
| c1 | | Robert Giegerich, Folker Meyer, Chris Schleiermacher: GeneFisher-Software Support for the Detection of Postulated Genes. ISMB 1996: 68-77 |
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