Johan Montagnat

Tristan Glatard, Carole Lartizien, Bernard Gibaud, Rafael Ferreira da Silva, Germain Forestier, Frederic Cervenansky, Martino Alessandrini, Hugues Benoit-Cattin, Olivier Bernard, Sorina Camarasu-Pop, Nadia Cerezo, Patrick Clarysse, Alban Gaignard, Patrick Hugonnard, Hervé Liebgott, Simon Marache, Adrien Marion, Johan Montagnat, Joachim Tabary, Denis Friboulet: A Virtual Imaging Platform for Multi-Modality Medical Image Simulation. IEEE Trans. Med. Imaging 32(1): 110-118 (2013)

Mathieu Acher, Philippe Collet, Alban Gaignard, Philippe Lahire, Johan Montagnat, Robert B. France: Composing multiple variability artifacts to assemble coherent workflows. Software Quality Journal 20(3-4): 689-734 (2012)

Bernard Gibaud, Germain Forestier, Hugues Benoit-Cattin, Frederic Cervenansky, Patrick Clarysse, Denis Friboulet, Alban Gaignard, Patrick Hugonnard, Carole Lartizien, Hervé Liebgott, Johan Montagnat, Joachim Tabary, Tristan Glatard: OntoVIP: An Ontology for the Annotation of Object Models Used for Medical Image Simulation. HISB 2012: 110

Annie Authossere, Frédéric Bertrand, Mireille Blay-Fornarino, Philippe Collet, Hubert Dubois, Stéphane Ducasse, Sophie Dupuy-Chessa, Catherine Faron-Zucker, Cyril Faucher, Jean-Yves Lafaye, Philippe Lahire, Olivier Le Goaer, Johan Montagnat, Anne-Marie Pinna-Dery: Interopérabilité des Systèmes d’Information : approches dirigées par les modèles. INFORSID 2012: 11-30

Javier Rojas Balderrama, Tram Truong Huu, Johan Montagnat: Scalable and Resilient Workflow Executions on Production Distributed Computing Infrastructures. ISPDC 2012: 119-126

Franck Michel, Johan Montagnat, Tristan Glatard: Technical support for Life Sciences communities on a production grid infrastructure. CoRR abs/1203.2366 (2012)

Tram Truong Huu, Guilherme Piegas Koslovski, Fabienne Anhalt, Johan Montagnat, Pascale Vicat-Blanc Primet: Joint Elastic Cloud and Virtual Network Framework for Application Performance-cost Optimization. J. Grid Comput. 9(1): 27-47 (2011)

Clementine Nemo, Mireille Blay-Fornarino, Johan Montagnat, Michel Riveill: Réparation de modèles par transformations idempotentes. Ingénierie des Systèmes d'Information 16(5): 73-108 (2011)

Alban Gaignard, Johan Montagnat, Bacem Wali, Bernard Gibaud: Characterizing Semantic Service Parameters with Role Concepts to Infer Domain-specific Knowledge at Runtime. KEOD 2011: 59-70

Sílvia D. Olabarriaga, Johan Montagnat: Special section: Medical imaging on grids. Future Generation Comp. Syst. 26(4): 678-680 (2010)

Diane Lingrand, Johan Montagnat, Janusz Martyniak, Dave Colling: Optimization of Jobs Submission on the EGEE Production Grid: Modeling Faults Using Workload. J. Grid Comput. 8(2): 305-321 (2010)

Tram Truong Huu, Johan Montagnat: Virtual Resources Allocation for Workflow-Based Applications Distribution on a Cloud Infrastructure. CCGRID 2010: 612-617

Guilherme Piegas Koslovski, Wai-Leong Yeow, Cédric Westphal, Tram Truong Huu, Johan Montagnat, Pascale Vicat-Blanc Primet: Reliability Support in Virtual Infrastructures. CloudCom 2010: 49-58

Diane Lingrand, Johan Montagnat: Efficient Resubmission Strategies to Design Robust Grid Production Environments. eScience 2010: 198-205

Javier Rojas Balderrama, Johan Montagnat, Diane Lingrand: jGASW: A Service-Oriented Framework Supporting HTC and Non-functional Concerns. ICWS 2010: 691-694

Ketan Maheshwari, Johan Montagnat: Scientific Workflow Development Using Both Visual and Script-Based Representation. SERVICES 2010: 328-335

Diane Lingrand, Tristan Glatard, Johan Montagnat: Modeling the latency on production grids with respect to the execution context. Parallel Computing 35(10-11): 493-511 (2009)

Ketan Maheshwari, Carole A. Goble, Paolo Missier, Johan Montagnat: Medical image processing workflow support on the EGEE grid with taverna. CBMS 2009: 1-7

Pascale Vicat-Blanc Primet, Jean-Patrick Gelas, Olivier Mornard, Guilherme Piegas Koslovski, Vincent Roca, Lionel Giraud, Johan Montagnat, Tram Truong Huu: A Scalable Security Model for Enabling Dynamic Virtual Private Execution Infrastructures on the Internet. CCGRID 2009: 348-355

Guilherme Piegas Koslovski, Tram Truong Huu, Johan Montagnat, Pascale Vicat-Blanc Primet: Executing Distributed Applications on Virtualized Infrastructures Specified with the VXDL Language and Managed by the HIPerNET Framework. CloudComp 2009: 3-19

Diane Lingrand, Johan Montagnat, Tristan Glatard: Modeling user submission strategies on production grids. HPDC 2009: 121-130

Sébastien Mosser, Mireille Blay-Fornarino, Johan Montagnat: Orchestration Evolution Following Dataflow Concepts: Introducing Unanticipated Loops inside a Legacy Workflow. ICIW 2009: 389-394

Diane Lingrand, Johan Montagnat, Janusz Martyniak, Dave Colling: Analyzing the EGEE Production Grid Workload: Application to Jobs Submission Optimization. JSSPP 2009: 37-58

Johan Montagnat, Benjamin Isnard, Tristan Glatard, Ketan Maheshwari, Mireille Blay-Fornarino: A data-driven workflow language for grids based on array programming principles. SC-WORKS 2009

Tristan Glatard, Johan Montagnat, David Emsellem, Diane Lingrand: A Service-Oriented Architecture enabling dynamic service grouping for optimizing distributed workflow execution. Future Generation Comp. Syst. 24(7): 720-730 (2008)

Nicolas Jacq, Jean Salzemann, F. Jacq, Yannick Legré, Emmanuel Medernach, Johan Montagnat, Astrid Maaß, Matthieu Reichstadt, Horst Schwichtenberg, Mahendrakar Sridhar, Vinod Kasam, Marc Zimmermann, M. Hofmann, Vincent Breton: Grid-enabled Virtual Screening Against Malaria. J. Grid Comput. 6(1): 29-43 (2008)

Johan Montagnat, Ákos Frohner, Daniel Jouvenot, Christophe Pera, Peter Z. Kunszt, Birger Koblitz, Nuno Santos, Charles Loomis, Romain Texier, Diane Lingrand, Patrick Guio, Ricardo Brito Da Rocha, Antonio Sobreira de Almeida, Zoltan Farkas: A Secure Grid Medical Data Manager Interfaced to the gLite Middleware. J. Grid Comput. 6(1): 45-59 (2008)

Johan Montagnat, Tristan Glatard, Isabel Campos Plasencia, Francisco Castejón, Xavier Pennec, Giuliano Taffoni, Vladimir Voznesensky, Claudio Vuerli: Workflow-Based Data Parallel Applications on the EGEE Production Grid Infrastructure. J. Grid Comput. 6(4): 369-383 (2008)

Tristan Glatard, Johan Montagnat, Diane Lingrand, Xavier Pennec: Flexible and Efficient Workflow Deployment of Data-Intensive Applications On Grids With MOTEUR. IJHPCA 22(3): 347-360 (2008)

Tristan Glatard, Johan Montagnat, Xavier Pennec: A Probabilistic Model to Analyse Workflow Performance on Production Grids. CCGRID 2008: 510-517

Tristan Glatard, Johan Montagnat: Implementation of Turing Machines with the Scufl Data-Flow Language. CCGRID 2008: 663-668

Diane Lingrand, Johan Montagnat, Tristan Glatard: Modeling the Latency on Production Grids with Respect to the Execution Context. CCGRID 2008: 753-758

Tristan Glatard, Johan Montagnat, Xavier Pennec: A framework for evaluating the impact of compression on registration algorithms without gold standard. ICIP 2008: 2912-2915

Mathieu Acher, Philippe Collet, Philippe Lahire, Johan Montagnat: Imaging Services on the Grid as a Product Line: Requirements and Architecture. SPLC (2) 2008: 137-142

Clementine Nemo-Cailliau, Tristan Glatard, Mireille Blay-Fornarino, Johan Montagnat: Merging overlapping orchestrations: an application to the Bronze Standard medical application. IEEE SCC 2007: 364-371

Tristan Glatard, Diane Lingrand, Johan Montagnat, Michel Riveill: Impact of the execution context on Grid job performances. CCGRID 2007: 713-718

Tristan Glatard, Johan Montagnat, Xavier Pennec: Efficient services composition for grid-enabled data-intensive applications. HPDC 2006: 333-334

Tristan Glatard, Xavier Pennec, Johan Montagnat: Performance Evaluation of Grid-Enabled Registration Algorithms Using Bronze-Standards. MICCAI (2) 2006: 152-160

Tristan Glatard, Johan Montagnat, Xavier Pennec: Probabilistic and Dynamic Optimization of Job Partitioning on a Grid Infrastructure. PDP 2006: 231-238

Nicolas Jacq, Jean Salzemann, F. Jacq, Yannick Legré, Emmanuel Medernach, Johan Montagnat, Astrid Maaß, Matthieu Reichstadt, Horst Schwichtenberg, Mahendrakar Sridhar, Vinod Kasam, Marc Zimmermann, Martin Hofmann, Vincent Breton: Grid enabled virtual screening against malaria. CoRR abs/q-bio/0611054 (2006)

Johan Montagnat, Hervé Delingette: 4D deformable models with temporal constraints: application to 4D cardiac image segmentation. Medical Image Analysis 9(1): 87-100 (2005)

Johan Montagnat, Patrick Clarysse, Jukka Nenonen, Toivo Katila, Isabelle E. Magnin: Editorial. Medical Image Analysis 9(4): 352 (2005)

Tristan Glatard, Johan Montagnat, Xavier Pennec: Grid-Enabled Workflows for Data Intensive Medical Applications. CBMS 2005: 537-542

Cécile Germain, Vincent Breton, Patrick Clarysse, Yann Gaudeau, Tristan Glatard, Emmanuel Jeannot, Yannick Legré, Charles Loomis, Johan Montagnat, Jean-Marie Moureaux, Angel Osorio, Xavier Pennec, Romain Texier: Grid-enabling medical image analysis. CCGRID 2005: 487-495

Sébastien Varrette, Sebastien Georget, Johan Montagnat, Jean-Louis Roch, Franck Leprévost: Distributed Authentication in GRID5000. OTM Workshops 2005: 314-326

Diane Lingrand, Johan Montagnat: Levelset and B-Spline Deformable Model Techniques for Image Segmentation: A Pragmatic Comparative Study. SCIA 2005: 25-34

Johan Montagnat, F. Bellet, Hugues Benoit-Cattin, Vincent Breton, Lionel Brunie, Hector Duque, Yannick Legré, Isabelle E. Magnin, Lydia Maigne, Serge Miguet, Jean-Marc Pierson, Ludwig Seitz, Tiffany Tweed: Medical Images Simulation, Storage, and Processing on the European DataGrid Testbed. J. Grid Comput. 2(4): 387-400 (2004)

Pascale Vicat-Blanc Primet, Johan Montagnat, Fabien Chanussot: Flexible and dynamic control of network QoS in grid environments: the QoSINUS approach. CLUSTER 2004: 492

Jean-Marc Pierson, Ludwig Seitz, Hector Duque, Johan Montagnat: MetaData for Efficient, Secure and Extensible Access to Data in a Medical Grid. DEXA Workshops 2004: 562-566

Diane Lingrand, Arnaud Charnoz, Pierre Malick Koulibaly, Jacques Darcourt, Johan Montagnat: Toward Accurate Segmentation of the LV Myocardium and Chamber for Volumes Estimation in Gated SPECT Sequences. ECCV (4) 2004: 267-278

Mohammed Javeed Zaki, David A. Bader, Johan Montagnat, Concettina Guerra: Topic 17: High Performance Bioinformatics. Euro-Par 2004: 988

Tristan Glatard, Johan Montagnat, Isabelle E. Magnin: Texture based medical image indexing and retrieval: application to cardiac imaging. Multimedia Information Retrieval 2004: 135-142

Vincent Breton, Christophe Blanchet, Yannick Legré, Lydia Maigne, Johan Montagnat: Grid Technology for Biomedical Applications. VECPAR 2004: 204-218

Johan Montagnat, Maxime Sermesant, Hervé Delingette, Grégoire Malandain, Nicholas Ayache: Anisotropic filtering for model-based segmentation of 4D cylindrical echocardiographic images. Pattern Recognition Letters 24(4-5): 815-828 (2003)

Hugues Benoit-Cattin, F. Bellet, Johan Montagnat, Christophe Odet: Magnetic Resonance Imaging (Mri) Simulation On A Grid Computing Architecture. CCGRID 2003: 582-587

Johan Montagnat, Vincent Breton, Isabelle E. Magnin: Using grid technologies to face medical image analysis challenges. CCGRID 2003: 588-593

Hector Duque, Johan Montagnat, Jean-Marc Pierson, Lionel Brunie, Isabelle E. Magnin: DM2: A Distributed Medical Data Manager for Grids. CCGRID 2003: 606-611

Arnaud Charnoz, Diane Lingrand, Johan Montagnat: A Levelset Based Method for Segmenting the Heart in 3D+T Gated SPECT Images. FIMH 2003: 52-61

Isabelle E. Magnin, Johan Montagnat, Patrick Clarysse, Jukka Nenonen, Toivo Katila (Eds.): Functional Imaging and Modeling of the Heart, Second International Workshop, FIMH 2003, Lyon, France, June 5-6, 2003 Proceedings. Lecture Notes in Computer Science 2674, Springer 2003, isbn 3-540-40262-4

Johan Montagnat, Eduardo Davila, Isabelle E. Magnin: 3D objects visualization for remote interactive medical applications. 3DPVT 2002: 75-78

Hervé Delingette, Johan Montagnat: Shape and Topology Constraints on Parametric Active Contours. Computer Vision and Image Understanding 83(2): 140-171 (2001)

Johan Montagnat, Hervé Delingette, Nicholas Ayache: A review of deformable surfaces: topology, geometry and deformation. Image Vision Comput. 19(14): 1023-1040 (2001)

D. Louis Collins, Johan Montagnat, Alex P. Zijdenbos, Alan C. Evans, Douglas L. Arnold: Automated Estimation of Brain Volume in Multiple Sclerosis with BICCR. IPMI 2001: 141-147

Toivo Katila, Isabelle E. Magnin, Patrick Clarysse, Johan Montagnat, Jukka Nenonen (Eds.): Functional Imaging and Modeling of the Heart, First International Workshop, Helsinki, Finland, November 15-16, 2001, Proceedings. Lecture Notes in Computer Science 2230, Springer 2001, isbn 3-540-42861-5

Hervé Delingette, Johan Montagnat: New Algorithms for Controlling Active Contours Shape and Topology. ECCV (2) 2000: 381-395

Johan Montagnat, Hervé Delingette, N. Scapel, Nicholas Ayache: Surface Simplex Meshes for 3D Medical Image Segmentation. ICRA 2000: 864-870

Johan Montagnat, Hervé Delingette: Space and Time Shape Constrained Deformable Surfaces for 4D Medical Image Segmentation. MICCAI 2000: 196-205

Johan Montagnat, Hervé Delingette, Grégoire Malandain: Cylindrical Echocardiographic Image Segmentation Based on 3D Deformable Models. MICCAI 1999: 168-175

Johan Montagnat, Hervé Delingette: Globally constrained deformable models for 3D object reconstruction. Signal Processing 71(2): 173-186 (1998)

Johan Montagnat, Hervé Delingette: A Hybrid Framework for Surface Registration and Deformable Models. CVPR 1997: 1041-1046

Johan Montagnat, Hervé Delingette: Volumetric medical images segmentation using shape constrained deformable models. CVRMed 1997: 13-22

Robert Rönngren, Michael Liljenstam, Rassul Ayani, Johan Montagnat: A comparative study of state saving mechanisms for time warp synchronized parallel discrete event simulation. Annual Simulation Symposium 1996: 5-14

Robert Rönngren, Michael Liljenstam, Rassul Ayani, Johan Montagnat: Transparent Incremental State Saving in Time Warp Parallel Discrete Event Simulation. Workshop on Parallel and Distributed Simulation 1996: 70-77