Please note: This is a beta version of the new dblp website.
You can find the classic dblp view of this page here.
You can find the classic dblp view of this page here.
Morten Nielsen
2010 – today
- 2013
[j34]Massimo Andreatta, Ole Lund, Morten Nielsen: Simultaneous alignment and clustering of peptide data using a Gibbs sampling approach. Bioinformatics 29(1): 8-14 (2013)- [j33]Rémi Gribonval, Morten Nielsen: The restricted isometry property meets nonlinear approximation with redundant frames. Journal of Approximation Theory 165(1): 1-19 (2013)
- [j32]Eugenio Hernández, Morten Nielsen, Hrvoje Sikic, Fernando Soria: Democratic systems of translates. Journal of Approximation Theory 171: 105-127 (2013)
- 2012
- [j31]Elin Teppa, Angela D. Wilkins, Morten Nielsen, Cristina Marino Buslje: Disentangling evolutionary signals: conservation, specificity determining positions and coevolution. Implication for catalytic residue prediction. BMC Bioinformatics 13: 235 (2012)
- [j30]Martin Christen Frølund Thomsen, Morten Nielsen: Seq2Logo: a method for construction and visualization of amino acid binding motifs and sequence profiles including sequence weighting, pseudo counts and two-sided representation of amino acid enrichment and depletion. Nucleic Acids Research 40(Web-Server-Issue): 281-287 (2012)
- [j29]Yohan Kim, Julia V. Ponomarenko, Zhanyang Zhu, Dorjee Tamang, Peng Wang, Jason Greenbaum, Claus Lundegaard, Alessandro Sette, Ole Lund, Philip E. Bourne, Morten Nielsen, Bjoern Peters: Immune epitope database analysis resource. Nucleic Acids Research 40(Web-Server-Issue): 525-530 (2012)
- 2010
- [j28]Peng Wang, John Sidney, Yohan Kim, Alessandro Sette, Ole Lund, Morten Nielsen, Björn Peters: Peptide binding predictions for HLA DR, DP and DQ molecules. BMC Bioinformatics 11: 568 (2010)
- [j27]Tommy Clausen, Allan Nordlunde Hjorth, Morten Nielsen, David Pisinger: The off-line group seat reservation problem. European Journal of Operational Research 207(3): 1244-1253 (2010)
- [j26]Morten Nielsen, Claus Lundegaard, Ole Lund, Thomas Nordahl Petersen: CPHmodels-3.0 - remote homology modeling using structure-guided sequence profiles. Nucleic Acids Research 38(Web-Server-Issue): 576-581 (2010)
- [j25]Cristina Marino Buslje, Elin Teppa, Tomás Di Domenico, José María Delfino, Morten Nielsen: Networks of High Mutual Information Define the Structural Proximity of Catalytic Sites: Implications for Catalytic Residue Identification. PLoS Computational Biology 6(11) (2010)
- [c7]Claus Lundegaard, M. Buggert, A. C. Karlsson, Ole Lund, Carina Perez, Morten Nielsen: PopCover: a method for selecting of peptides with optimal population and pathogen coverage. BCB 2010: 658-659
2000 – 2009
- 2009
- [j24]Hao Zhang, Claus Lundegaard, Morten Nielsen: Pan-specific MHC class I predictors: a benchmark of HLA class I pan-specific prediction methods. Bioinformatics 25(1): 83-89 (2009)
- [j23]Cristina Marino Buslje, Javier Santos, José María Delfino, Morten Nielsen: Correction for phylogeny, small number of observations and data redundancy improves the identification of coevolving amino acid pairs using mutual information. Bioinformatics 25(9): 1125-1131 (2009)
- [j22]Hao Zhang, Ole Lund, Morten Nielsen: The PickPocket method for predicting binding specificities for receptors based on receptor pocket similarities: application to MHC-peptide binding. Bioinformatics 25(10): 1293-1299 (2009)
- [j21]Morten Nielsen, Ole Lund: NN-align. An artificial neural network-based alignment algorithm for MHC class II peptide binding prediction. BMC Bioinformatics 10: 296 (2009)
- 2008
- [j20]Rémi Gribonval, Morten Nielsen: Beyond sparsity: Recovering structured representations by l1{\ell}^1 minimization and greedy algorithms. Adv. Comput. Math. 28(1): 23-41 (2008)
- [j19]Claus Lundegaard, Ole Lund, Morten Nielsen: Accurate approximation method for prediction of class I MHC affinities for peptides of length 8, 10 and 11 using prediction tools trained on 9mers. Bioinformatics 24(11): 1397-1398 (2008)
- [j18]Morten Nielsen, Hrvoje Sikic: Quasi-greedy systems of integer translates. Journal of Approximation Theory 155(1): 43-51 (2008)
- [j17]Claus Lundegaard, Kasper Lamberth, Mikkel Harndahl, Søren Buus, Ole Lund, Morten Nielsen: NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8-11. Nucleic Acids Research 36(Web-Server-Issue): 509-512 (2008)
- [j16]Qing Zhang, Peng Wang, Yohan Kim, Pernille Haste-Andersen, John E. Beaver, Philip E. Bourne, Huynh-Hoa Bui, Søren Buus, Sune Frankild, Jason Greenbaum, Ole Lund, Claus Lundegaard, Morten Nielsen, Julia V. Ponomarenko, Alessandro Sette, Zhanyang Zhu, Björn Peters: Immune epitope database analysis resource (IEDB-AR). Nucleic Acids Research 36(Web-Server-Issue): 513-518 (2008)
- [j15]Morten Nielsen, Claus Lundegaard, Thomas Blicher, Bjoern Peters, Alessandro Sette, Sune Justesen, Søren Buus, Ole Lund: Quantitative Predictions of Peptide Binding to Any HLA-DR Molecule of Known Sequence: NetMHCIIpan. PLoS Computational Biology 4(7) (2008)
- 2007
- [j14]Morten Nielsen: On polynomial symbols for subdivision schemes. Adv. Comput. Math. 27(2): 195-209 (2007)
- [j13]Claus Lundegaard, Ole Lund, Can Kesmir, Søren Brunak, Morten Nielsen: Modeling the adaptive immune system: predictions and simulations. Bioinformatics 23(24): 3265-3275 (2007)
- [j12]Mette V. Larsen, Claus Lundegaard, Kasper Lamberth, Søren Buus, Ole Lund, Morten Nielsen: Large-scale validation of methods for cytotoxic T-lymphocyte epitope prediction. BMC Bioinformatics 8 (2007)
- [j11]Morten Nielsen, Claus Lundegaard, Ole Lund: Prediction of MHC class II binding affinity using SMM-align, a novel stabilization matrix alignment method. BMC Bioinformatics 8 (2007)
- [j10]Morten Nielsen: An example of an almost greedy uniformly bounded orthonormal basis for Lp(0, 1). Journal of Approximation Theory 149(2): 188-192 (2007)
- 2006
- [j9]Bjoern Peters, Huynh-Hoa Bui, Sune Frankild, Morten Nielsen, Claus Lundegaard, Emrah Kostem, Derek Basch, Kasper Lamberth, Mikkel Harndahl, Ward Fleri, Stephen S. Wilson, John Sidney, Ole Lund, Søren Buus, Alessandro Sette: A Community Resource Benchmarking Predictions of Peptide Binding to MHC-I Molecules. PLoS Computational Biology 2(6) (2006)
- [j8]Rémi Gribonval, Morten Nielsen: Sparse approximations in signal and image processing. Signal Processing 86(3): 415-416 (2006)
- 2004
- [j7]Morten Nielsen, Claus Lundegaard, Peder Worning, Christina Sylvester-Hvid, Kasper Lamberth, Søren Buus, Søren Brunak, Ole Lund: Improved prediction of MHC class I and class II epitopes using a novel Gibbs sampling approach. Bioinformatics 20(9): 1388-1397 (2004)
- [c6]Rémi Gribonval, Morten Nielsen: On the Strong Uniqueness of Highly Sparse Representations from Redundant Dictionaries. ICA 2004: 201-208
- [c5]Claus Lundegaard, Morten Nielsen, Kasper Lamberth, Peder Worning, Christina Sylvester-Hvid, Søren Buus, Søren Brunak, Ole Lund: MHC Class I Epitope Binding Prediction Trained on Small Data Sets. ICARIS 2004: 217-225
- 2003
- [j6]Lasse Borup, Morten Nielsen: Approximation with brushlet systems. Journal of Approximation Theory 123(1): 25-51 (2003)
- [j5]Jens Kaae Christensen, Kasper Lamberth, Morten Nielsen, Claus Lundegaard, Peder Worning, Sanne Lise Lauemøller, Søren Buus, Søren Brunak, Ole Lund: Selecting Informative Data for Developing Peptide-MHC Binding Predictors Using a Query by Committee Approach. Neural Computation 15(12): 2931-2942 (2003)
- [j4]Lasse Borup, Morten Nielsen: Fast adaptive expansions in local trigonometric bases. Signal Processing 83(2): 445-451 (2003)
- [j3]Rémi Gribonval, Morten Nielsen: Sparse representations in unions of bases. IEEE Transactions on Information Theory 49(12): 3320-3325 (2003)
- [c4]Rémi Gribonval, Morten Nielsen: Sparse decompositions in "incoherent" dictionaries. ICIP (1) 2003: 33-36
- [c3]Claus Lundegaard, Thomas Nordahl Petersen, Morten Nielsen, Henrik Bohr, Jakob Bohr, Søren Brunak, Garry Gippert, Ole Lund: Prediction of Protein Secondary Structure at High Accuracy Using a Combination of Many Neural Networks. Mathematical Methods for Protein Structure Analysis and Design 2003: 117-122
- 2001
- [j2]Rémi Gribonval, Morten Nielsen: Approximate Weak Greedy Algorithms. Adv. Comput. Math. 14(4): 361-378 (2001)
- [j1]Morten Nielsen: On the Construction and Frequency Localization of Finite Orthogonal Quadrature Filters. Journal of Approximation Theory 108(1): 36-52 (2001)
- [c2]Peter H. Carstensen, Morten Nielsen: Characterizing modes of coordination: a comparison between oral and artifact based coordination. GROUP 2001: 81-90
1990 – 1999
- 1997
- [c1]Peter H. Carstensen, Morten Nielsen: Towards Computer Support for Cooperation in Time-Critical Work Settings. HCI (1) 1997: 101-104
Coauthor Index
data released under the ODC-BY 1.0 license. See also our legal information page
last updated on 2013-05-25 21:20 CEST by the dblp team