Joshua Orvis

Martha B. Arnaud, Gustavo C. Cerqueira, Diane O. Inglis, Marek S. Skrzypek, Jonathan Binkley, Marcus C. Chibucos, Jonathan Crabtree, Clinton Howarth, Joshua Orvis, Prachi Shah, Farrell Wymore, Gail Binkley, Stuart R. Miyasato, Matt Simison, Gavin Sherlock, Jennifer R. Wortman: The Aspergillus Genome Database (AspGD): recent developments in comprehensive multispecies curation, comparative genomics and community resources. Nucleic Acids Research 40(Database-Issue): 653-659 (2012)

Joshua Orvis, Jonathan Crabtree, Kevin Galens, Aaron Gussman, Jason M. Inman, Eduardo Lee, Sreenath Nampally, David R. Riley, Jaideep P. Sundaram, Victor Felix, Brett Whitty, Anup Mahurkar, Jennifer R. Wortman, Owen White, Samuel V. Angiuoli: Ergatis: a web interface and scalable software system for bioinformatics workflows. Bioinformatics 26(12): 1488-1492 (2010)

Lauren M. Brinkac, Tanja Davidsen, Erin Beck, Anuradha Ganapathy, Elisabet Caler, Robert J. Dodson, A. Scott Durkin, Derek M. Harkins, Hernan Lorenzi, Ramana Madupu, Yinong Sebastian, Susmita Shrivastava, Mathangi Thiagarajan, Joshua Orvis, Jaideep P. Sundaram, Jonathan Crabtree, Kevin Galens, Yongmei Zhao, Jason M. Inman, Robert Montgomery, Seth Schobel, Kevin Galinsky, David M. Tanenbaum, Adam Resnick, Nikhat Zafar, Owen White, Granger G. Sutton: Pathema: a clade-specific bioinformatics resource center for pathogen research. Nucleic Acids Research 38(Database-Issue): 408-414 (2010)

Martha B. Arnaud, Marcus C. Chibucos, Maria C. Costanzo, Jonathan Crabtree, Diane O. Inglis, Adil Lotia, Joshua Orvis, Prachi Shah, Marek S. Skrzypek, Gail Binkley, Stuart R. Miyasato, Jennifer R. Wortman, Gavin Sherlock: The Aspergillus Genome Database, a curated comparative genomics resource for gene, protein and sequence information for the Aspergillus research community. Nucleic Acids Research 38(Database-Issue): 420-427 (2010)

Shu Ouyang, Wei Zhu, John A. Hamilton Jr., Haining Lin, Matthew Campbell, Kevin L. Childs, Françoise Thibaud-Nissen, Renae L. Malek, Yuandan Lee, Li Zheng, Joshua Orvis, Brian Haas, Jennifer R. Wortman, C. Robin Buell: The TIGR Rice Genome Annotation Resource: improvements and new features. Nucleic Acids Research 35(Database-Issue): 883-887 (2007)