Mathew J. Palakal

Tulip Nandu, Meeta Pradhan, Mathew J. Palakal: Elucidating gene signatures that control the circadian rhythm in cyanobacteria using bioinformatics methods. BMC Bioinformatics 13(S-18): A9 (2012)

Deepali Jhamb, Nandini Rao, Derek J. Milner, Fengyu Song, Jo Ann Cameron, David L. Stocum, Mathew J. Palakal: Network based transcription factor analysis of regenerating axolotl limbs. BMC Bioinformatics 12: 80 (2011)

Yue W. Webster, Ernst R. Dow, Jacob Koehler, Ranga Chandra Gudivada, Mathew J. Palakal: Leveraging health social networking communities in translational research. Journal of Biomedical Informatics 44(4): 536-544 (2011)

Sandeep Raghuram, Yuni Xia, Jiaqi Ge, Mathew Palakal, Josette F. Jones, Dave Pecenka, Eric Tinsley, Jean Bandos, Jerry Geesaman: AutoBayesian: Developing Bayesian Networks Based on Text Mining. DASFAA (2) 2011: 450-453

William C. Chu, W. Eric Wong, Mathew J. Palakal, Chih-Cheng Hung (Eds.): Proceedings of the 2011 ACM Symposium on Applied Computing (SAC), TaiChung, Taiwan, March 21 - 24, 2011. ACM 2011, isbn 978-1-4503-0113-8

Osmar Norberto de Souza, Guilherme P. Telles, Mathew J. Palakal (Eds.): Advances in Bioinformatics and Computational Biology - 6th Brazilian Symposium on Bioinformatics, BSB 2011, Brasilia, Brazil, August 10-12, 2011. Proceedings. Lecture Notes in Computer Science 6832, Springer 2011, isbn 978-3-642-22824-7

Snehasis Mukhopadhyay, Mathew J. Palakal, Kalyan Maddu: Multi-way association extraction and visualization from biological text documents using hyper-graphs: Applications to genetic association studies for diseases. Artificial Intelligence in Medicine 49(3): 145-154 (2010)

Meeta Pradhan, Lakenvia Ledford, Yogesh Pandit, Mathew Palakal: Global analysis of miRNA target genes in colon rectal cancer. BIBM 2010: 341-345

Meeta Pradhan, Mathew Palakal: Identifying CRC Specific Pathways and Drug Targets from Literature Augmented Proteomics Data. BIOCOMP 2010: 323-331

Yue W. Webster, Ranga Chandra Gudivada, Ernst R. Dow, Jacob Koehler, Mathew J. Palakal: A framework for cross-disciplinary hypothesis generation. SAC 2010: 1511-1515

Zi Ning, Ji Soo Yi, Mathew J. Palakal, Anna M. McDaniel: OncoViz: a user-centric mining and visualization tool for cancer-related literature. SAC 2010: 1827-1828

Sung Y. Shin, Sascha Ossowski, Michael Schumacher, Mathew J. Palakal, Chih-Cheng Hung (Eds.): Proceedings of the 2010 ACM Symposium on Applied Computing (SAC), Sierre, Switzerland, March 22-26, 2010. ACM 2010, isbn 978-1-60558-639-7

Mathew Palakal, Pavithra G. Naidu: An on demand data integration model for biological databases. IJDMB 3(1): 40-54 (2009)

Yue W. Webster, Ranga Chandra Gudivada, Ernst R. Dow, Jacob Koehler, Mathew J. Palakal: A Hybrid Method to Discover and Rank Cross-Disciplinary Associations. BIBM 2009: 362-365

Steven Mannheimer, Mexhid Ferati, Donald Huckleberry, Mathew J. Palakal: Using Audemes as a Learning Medium for the Visually Impaired. HEALTHINF 2009: 175-180

Steven Mannheimer, Mexhid Ferati, Davide Bolchini, Mathew J. Palakal: Educational Sound Symbols for the Visually Impaired. HCI (5) 2009: 106-115

Sandeep Raghuram, Yuni Xia, Mathew Palakal, Josette F. Jones, Dave Pecenka, Eric Tinsley, Jean Bandos, Jerry Geesaman: Bridging Text Mining and Bayesian Networks. NBiS 2009: 298-303

Snehasis Mukhopadhyay, Shengquan Peng, Rajeev R. Raje, Mathew J. Palakal, Javed Mostafa: Comparison of Some Single-agent and Multi-agent Information Filtering Systems on a Benchmark Text Data Set. SEKE 2009: 185-188

Snehasis Mukhopadhyay, Mathew J. Palakal, Kalyan Maddu: Multi-way Association Extraction from Biological Text Documents Using Hyper-Graphs. BIBM 2008: 257-262

Shiaofen Fang, Basil George, Mathew Palakal: Automatic Surface Scanning of 3D Artifacts. CW 2008: 335-341

Andrew Campen, Yuni Xia, Dan Rigsby, Ying Guo, Xingdong Feng, Eric W. Su, Mathew Palakal, Shuyu Li: Mining Gene Expression Database for Primary Human Disease Tissues. ICDE 2008: 1604-1607

Mathew J. Palakal, William Perrizo, Kanagasabai Rajaraman: Special track on Bioinformatics: editorial message. SAC 2008: 1260

Anna Antony, Srilaxmi Basetty, Shielly Hartanto, Mathew J. Palakal: Computational approach to biological validation of protein-protein interactions discovered using literature mining. SAC 2008: 1302-1306

Rani J. Swargam, Mathew J. Palakal: The role of least frequent item sets in association discovery. ICDIM 2007: 217-223

Pavithra G. Naidu, Mathew J. Palakal, Shielly Hartanto: On-the-fly data integration models for biological databases. SAC 2007: 118-122

Yuan-Shun Dai, Mathew J. Palakal, Shielly Hartanto, Xiaolong Wang, Yanming Guo: A Grid-Based Pseudo-Cache solution for MISD biomedical problems with high confidentiality and efficiency. IJBRA 2(3): 259-281 (2006)

Mathew J. Palakal, William Perrizo: Editorial message: special track on bioinformatics. SAC 2006: 130

Ramana M. Pidaparti, Mathew J. Palakal, Long Fang: Cellular Automata Approach to Aircraft Corrosion Growth. International Journal on Artificial Intelligence Tools 14(1-2): 361-369 (2005)

Snehasis Mukhopadhyay, Shengquan Peng, Rajeev R. Raje, Javed Mostafa, Mathew J. Palakal: Distributed multi-agent information filtering - A comparative study. JASIST 56(8): 834-842 (2005)

Mathew J. Palakal, Sven Rahmann, Birong Liao: Editorial message: special track on bioinformatics. SAC 2005: 99

Niranjan Jayadevaprakash, Snehasis Mukhopadhyay, Mathew J. Palakal: Generating association graphs of non-cooccurring text objects using transitive methods. SAC 2005: 141-145

Rajeev R. Raje, Daocheng Zhu, Snehasis Mukhopadhyay, Liying Tang, Mathew J. Palakal, Javed Mostafa: COBioSIFTER - A CORBA-Based Distributed Multi-Agent Biological Information Management System. Cluster Computing 7(4): 373-389 (2004)

Ramana Pidaparti, Mathew J. Palakal, Long Fong: Cellular Automata Approach to Aircraft Corrosion Pit Growth. FLAIRS Conference 2004: 93-98

Warren T. Jones, Mathew J. Palakal, Jake Yue Chen: Editorial message: special track on bioinformatics. SAC 2004: 101

Kamal Kumar, Mathew J. Palakal, Snehasis Mukhopadhyay, Matthew J. Stephens, Huian Li: BioMap: toward the development of a knowledge base of biomedical literature. SAC 2004: 121-127

Javed Mostafa, Snehasis Mukhopadhyay, Mathew J. Palakal: Simulation Studies of Different Dimensions of Users' Interests and their Impact on User Modeling and Information Filtering. Inf. Retr. 6(2): 199-223 (2003)

Snehasis Mukhopadhyay, Shengquan Peng, Rajeev R. Raje, Mathew J. Palakal, Javed Mostafa: Multi-agent information classification using dynamic acquaintance lists. JASIST 54(10): 966-975 (2003)

Mathew J. Palakal, Matthew J. Stephens, Snehasis Mukhopadhyay, Rajeev R. Raje, Simon Rhodes: Identification of Biological Relationships from Text Documentsusing Efficient Computational Methods. J. Bioinformatics and Computational Biology 1(2): 307-342 (2003)

Snehasis Mukhopadhyay, Changhong Tang, Jeffrey Huang, Mathew J. Palakal: Genetic Sequence Classification and its Application to Cross-Species Homology Detection. VLSI Signal Processing 35(3): 273-285 (2003)

Warren T. Jones, Mathew J. Palakal: Bioinformatics Track Editorial. SAC 2003: 66

Mathew J. Palakal, Snehasis Mukhopadhyay, Javed Mostafa, Rajeev R. Raje, Mathias N'Cho, Santosh Mishra: An intelligent biological information management system. Bioinformatics 18(10): 1283-1288 (2002)

Rajeev R. Raje, Mingyong Qiao, Snehasis Mukhopadhyay, Mathew J. Palakal, Shengquan Peng, Javed Mostafa: Homogeneous Agent-Based Distributed Information Filtering. Cluster Computing 5(4): 377-388 (2002)

Jeffrey Huang, Deepa Umamaheswaran, Mathew J. Palakal: Video Indexing and Retrieval for Archeological Digital Library, CLIOH. CIVR 2002: 289-298

Mathew J. Palakal, Matthew J. Stephens, Snehasis Mukhopadhyay, Rajeev R. Raje, Simon Rhodes: A Multi-Level Text Mining Method to Extract Biological Relationships. CSB 2002: 97-108

Deepa Umamaheswaran, Jeffrey Huang, Mathew J. Palakal, Suzali Suyut: Video Scene Analysis Using Best Basis Wavelets and Learnin Strategies. JCIS 2002: 680-683

Mathew J. Palakal, Snehasis Mukhopadhyay, Javed Mostafa: An intelligent biological information management system. SAC 2002: 159-163

Yueyu Fu, Travis Bauer, Javed Mostafa, Mathew J. Palakal, Snehasis Mukhopadhyay: Concept extraction and association from cancer literature. WIDM 2002: 100-103

Shengquan Peng, Snehasis Mukhopadhyay, Rajeev R. Raje, Mathew J. Palakal, Javed Mostafa: A Comparison Between Single-agent and Multi-agent Classification of Documents. IPDPS 2001: 90

Matthew J. Stephens, Mathew J. Palakal, Snehasis Mukhopadhyay, Rajeev R. Raje, Javed Mostafa: Detecting Gene Relations from MEDLINE Abstracts. Pacific Symposium on Biocomputing 2001: 483-496

Javed Mostafa, Luz Marina Quiroga, Mathew J. Palakal: Filtering Medical Documents Using Automated and Human Classification Methods. JASIS 49(14): 1304-1318 (1998)

Y. P. Chien, Anand Hudli, Mathew Palakal: Using Many-Sorted Logic in the Object-Oriented Data Model for Fast Robot Task Planning. Journal of Intelligent and Robotic Systems 23(1): 1-25 (1998)

Michael Boyles, Javed Mostafa, Snehasis Mukhopadhyay, Mathew J. Palakal, Artur Papiez, Nila Patel, Rajeev R. Raje: A Bidding Mechanism for Web-Based Agents Involved in Information Classification. World Wide Web 1(3): 155-165 (1998)

Mathew J. Palakal, Frederick W. Myers, Carla L. Boyd: An interactive learning environment for breadth-first computing science curriculum. SIGCSE 1998: 1-5

Javed Mostafa, Snehasis Mukhopadhyay, Wai Lam, Mathew J. Palakal: A Multilevel Approach to Intelligent Information Filtering: Model, System, and Evaluation. ACM Trans. Inf. Syst. 15(4): 368-399 (1997)

S. Y. P. Chien, L. Q. Xue, Mathew J. Palakal: Task planning for a mobile robot in an indoor environment using object-oriented domain information. IEEE Transactions on Systems, Man, and Cybernetics, Part B 27(6): 1007-1016 (1997)

Wai Lam, Snehasis Mukhopadhyay, Javed Mostafa, Mathew J. Palakal: Detection of Shifts in User Interests for Personalized Information Filtering. SIGIR 1996: 317-325

Renato de Mori, Mathew J. Palakal, Piero Cosi: Perceptual Models for Automatic Speech Recognition Systems. Advances in Computers 31: 99-173 (1990)

Renato de Mori, Ettore Merlo, Mathew J. Palakal, Jean Rouat: Use of Procedural Knowledge for Automatic Speech Recognition. IJCAI 1987: 840-843

Renato de Mori, Mathew J. Palakal: On the Use of a Taxonomy of Time-Frequency Morphologies for Automatic Speech Recognition. IJCAI 1985: 877-879