Julian Parkhill

Tim Carver, Simon R. Harris, Thomas D. Otto, Matthew Berriman, Julian Parkhill, Jacqueline A. McQuillan: BamView: visualizing and interpretation of next-generation sequencing read alignments. Briefings in Bioinformatics 14(2): 203-212 (2013)

Tim Carver, Simon R. Harris, Matthew Berriman, Julian Parkhill, Jacqueline A. McQuillan: Artemis: an integrated platform for visualization and analysis of high-throughput sequence-based experimental data. Bioinformatics 28(4): 464-469 (2012)

Francesc Coll, Kim Mallard, Mark D. Preston, Stephen Bentley, Julian Parkhill, Ruth McNerney, Nigel Martin, Taane G. Clark: SpolPred: rapid and accurate prediction of Mycobacterium tuberculosis spoligotypes from short genomic sequences. Bioinformatics 28(22): 2991-2993 (2012)

Flora J. Logan-Klumpler, Nishadi De Silva, Ulrike Böhme, Matthew B. Rogers, Giles Velarde, Jacqueline A. McQuillan, Tim Carver, Martin Aslett, Christian Olsen, Sandhya Subramanian, Isabelle Phan, Carol Farris, Siddhartha Mitra, Gowthaman Ramasamy, Haiming Wang, Adrian Tivey, Andrew Jackson, Robin Houston, Julian Parkhill, Matthew Holden, Omar S. Harb, Brian P. Brunk, Peter J. Myler, David S. Roos, Mark Carrington, Deborah F. Smith, Christiane Hertz-Fowler, Matthew Berriman: GeneDB - an annotation database for pathogens. Nucleic Acids Research 40(Database-Issue): 98-108 (2012)

Tim Carver, Ulrike Böhme, Thomas D. Otto, Julian Parkhill, Matthew Berriman: BamView: viewing mapped read alignment data in the context of the reference sequence. Bioinformatics 26(5): 676-677 (2010)

Tim J. Carver, Nick Thomson, Alan J. Bleasby, Matthew Berriman, Julian Parkhill: DNAPlotter: circular and linear interactive genome visualization. Bioinformatics 25(1): 119-120 (2009)

Kathryn E. Holt, Yik Y. Teo, Heng Li, Satheesh Nair, Gordon Dougan, John Wain, Julian Parkhill: Detecting SNPs and estimating allele frequencies in clonal bacterial populations by sequencing pooled DNA. Bioinformatics 25(16): 2074-2075 (2009)

Tim J. Carver, Matthew Berriman, Adrian Tivey, Chinmay Patel, Ulrike Böhme, Bart Barrell, Julian Parkhill, Marie-Adèle Rajandream: Artemis and ACT: viewing, annotating and comparing sequences stored in a relational database. Bioinformatics 24(23): 2672-2676 (2008)

Georgios S. Vernikos, Julian Parkhill: Interpolated variable order motifs for identification of horizontally acquired DNA: revisiting the Salmonella pathogenicity islands. Bioinformatics 22(18): 2196-2203 (2006)

Tim J. Carver, Kim Rutherford, Matthew Berriman, Marie-Adèle Rajandream, Bart Barrell, Julian Parkhill: ACT: the Artemis comparison tool. Bioinformatics 21(16): 3422-3423 (2005)

Christiane Hertz-Fowler, Chris S. Peacock, Valerie Wood, Martin Aslett, Arnaud Kerhornou, Paul Mooney, Adrian Tivey, Matthew Berriman, Neil Hall, Kim Rutherford, Julian Parkhill, Alasdair C. Ivens, Marie-Adèle Rajandream, Bart Barrell: GeneDB: a resource for prokaryotic and eukaryotic organisms. Nucleic Acids Research 32(Database-Issue): 339-343 (2004)

Kim Rutherford, Julian Parkhill, James Crook, Terry Horsnell, Peter Rice, Marie-Adèle Rajandream, Bart Barrell: Artemis: sequence visualization and annotation. Bioinformatics 16(10): 944-945 (2000)