Simon Penel

Vincent Miele, Simon Penel, Vincent Daubin, Franck Picard, Daniel Kahn, Laurent Duret: High-quality sequence clustering guided by network topology and multiple alignment likelihood. Bioinformatics 28(8): 1078-1085 (2012)

Vincent Miele, Simon Penel, Laurent Duret: Ultra-fast sequence clustering from similarity networks with SiLiX. BMC Bioinformatics 12: 116 (2011)

Leonor Palmeira, Simon Penel, Vincent Lotteau, Chantal Rabourdin-Combe, Christian Gautier: PhEVER: a database for the global exploration of virus-host evolutionary relationships. Nucleic Acids Research 39(Database-Issue): 569-575 (2011)

Simon Penel, Anne-Muriel Arigon, Jean-François Dufayard, Anne-Sophie Sertier, Vincent Daubin, Laurent Duret, Manolo Gouy, Guy Perrière: Databases of homologous gene families for comparative genomics. BMC Bioinformatics 10(S-6) (2009)

Jean-François Dufayard, Laurent Duret, Simon Penel, Manolo Gouy, François Rechenmann, Guy Perrière: Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databases. Bioinformatics 21(11): 2596-2603 (2005)

Paul Kersey, Lawrence Bower, Lorna Morris, Alan Horne, Robert Petryszak, Carola Kanz, Alexander Kanapin, Ujjwal Das, Karine Michoud, Isabelle Phan, Alexandre Gattiker, Tamara Kulikova, Nadeem Faruque, Karyn Duggan, Peter Mclaren, Britt Reimholz, Laurent Duret, Simon Penel, Ingmar Reuter, Rolf Apweiler: Integr8 and Genome Reviews: integrated views of complete genomes and proteomes. Nucleic Acids Research 33(Database-Issue): 297-302 (2005)

Eric Bazin, Laurent Duret, Simon Penel, Nicolas Galtier: Polymorphix: a sequence polymorphism database. Nucleic Acids Research 33(Database-Issue): 481-484 (2005)

Guy Perrière, Christophe Combet, Simon Penel, Christophe Blanchet, Jean Thioulouse, Christophe Geourjon, Julien Grassot, Céline Charavay, Manolo Gouy, Laurent Duret, Gilbert Deléage: Integrated databanks access and sequence/structure analysis services at the PBIL. Nucleic Acids Research 31(13): 3393-3399 (2003)