Hanchuan Peng

Jinzhu Yang, Paloma T. Gonzalez-Bellido, Hanchuan Peng: A distance-field based automatic neuron tracing method. BMC Bioinformatics 14: 93 (2013)

Hanchuan Peng, Alex Bateman, Alfonso Valencia, Jonathan D. Wren: Bioimage informatics: a new category in Bioinformatics. Bioinformatics 28(8): 1057 (2012)

Fuhui Long, Jianlong Zhou, Hanchuan Peng: Visualization and Analysis of 3D Microscopic Images. PLoS Computational Biology 8(6) (2012)

Hanchuan Peng, Fuhui Long, Gene Myers: Automatic 3D neuron tracing using all-path pruning. Bioinformatics [ISMB/ECCB] 27(13): 239-247 (2011)

Lei Qu, Fuhui Long, Xiao Liu, Stuart K. Kim, Eugene W. Myers, Hanchuan Peng: Simultaneous recognition and segmentation of cells: application in C.elegans. Bioinformatics 27(20): 2895-2902 (2011)

Jun Xie, Ting Zhao, Tzumin Lee, Eugene W. Myers, Hanchuan Peng: Anisotropic path searching for automatic neuron reconstruction. Medical Image Analysis 15(5): 680-689 (2011)

Hanchuan Peng, Fuhui Long, Ting Zhao, Eugene W. Myers: Proof-editing is the Bottleneck Of 3D Neuron Reconstruction: The Problem and Solutions. Neuroinformatics 9(2-3): 103-105 (2011)

Ting Zhao, Jun Xie, Fernando Amat, Nathan G. Clack, Parvez Ahammad, Hanchuan Peng, Fuhui Long, Eugene W. Myers: Automated Reconstruction of Neuronal Morphology Based on Local Geometrical and Global Structural Models. Neuroinformatics 9(2-3): 247-261 (2011)

Jie Zhou, Hanchuan Peng: Counting cells in 3D confocal images based on discriminative models. BCB 2011: 399-403

Min Liu, Hanchuan Peng, Amit K. Roy Chowdhury, Eugene W. Myers: 3D Neuron Tip Detection in Volumetric Microscopy Images. BIBM 2011: 366-371

Yang Yu, Hanchuan Peng: Automated high speed stitching of large 3D microscopic images. ISBI 2011: 238-241

Hanchuan Peng, Fuhui Long: Seeing More Is Knowing More: V3D Enables Real-Time 3D Visualization and Quantitative Analysis of Large-Scale Biological Image Data Sets. RECOMB 2011: 336

Lei Qu, Hanchuan Peng: A principal skeleton algorithm for standardizing confocal images of fruit fly nervous systems. Bioinformatics 26(8): 1091-1097 (2010)

Hanchuan Peng, Zongcai Ruan, Deniz Atasoy, Scott Sternson: Automatic reconstruction of 3D neuron structures using a graph-augmented deformable model. Bioinformatics [ISMB] 26(12): 38-46 (2010)

Jun Xie, Ting Zhao, Tzumin Lee, Eugene W. Myers, Hanchuan Peng: Automatic Neuron Tracing in Volumetric Microscopy Images with Anisotropic Path Searching. MICCAI (2) 2010: 472-479

Hanchuan Peng, Fuhui Long, Eugene W. Myers: VANO: a volume-object image annotation system. Bioinformatics 25(5): 695-697 (2009)

Tianming Liu, Hanchuan Peng, Xiaobo Zhou: Imaging informatics for personalised medicine: applications and challenges. I. J. Functional Informatics and Personalised Medicine 2(2): 125-135 (2009)

Hanchuan Peng, Fuhui Long, Xiao Liu, Stuart K. Kim, Eugene W. Myers: Straightening Caenorhabditis elegans images. Bioinformatics 24(2): 234-242 (2008)

Hanchuan Peng: Bioimage informatics: a new area of engineering biology. Bioinformatics 24(17): 1827-1836 (2008)

Jie Zhou, Hanchuan Peng, Ching Y. Suen: Data-driven decomposition for multi-class classification. Pattern Recognition 41(1): 67-76 (2008)

Fuhui Long, Hanchuan Peng, Xiao Liu, Stuart K. Kim, Gene Myers: Automatic Recognition of Cells (ARC) for 3D Images of C. elegans. RECOMB 2008: 128-139

Jie Zhou, Hanchuan Peng: Automatic recognition and annotation of gene expression patterns of fly embryos. Bioinformatics 23(5): 589-596 (2007)

Jie Zhou, Hanchuan Peng: Automatic recognition and annotation of gene expression patterns of fly embryos. Bioinformatics 23(12): 1571-1572 (2007)

Hanchuan Peng, Fuhui Long, Eugene W. Myers: Straightening Worm Images. ISBI 2007: 292-295

Fuhui Long, Hanchuan Peng, Eugene W. Myers: Automatic Segmentation of Nuclei in 3d Microscopy Images of C.Elegans. ISBI 2007: 536-539

Chris H. Q. Ding, Xiaofeng He, Hui Xiong, Hanchuan Peng, Stephen R. Holbrook: Transitive closure and metric inequality of weighted graphs: detecting protein interaction modules using cliques. IJDMB 1(2): 162-177 (2006)

Hanchuan Peng, Fuhui Long, Michael B. Eisen, Eugene W. Myers: Clustering gene expression patterns of fly embryos. ISBI 2006: 1144-1147

Huan Liu, Edward R. Dougherty, Jennifer G. Dy, Kari Torkkola, Eugene Tuv, Hanchuan Peng, Chris H. Q. Ding, Fuhui Long, Michael E. Berens, Lance Parsons, Zheng Zhao, Lei Yu, George Forman: Evolving Feature Selection. IEEE Intelligent Systems 20(6): 64-76 (2005)

Chris H. Q. Ding, Hanchuan Peng: Minimum Redundancy Feature Selection from Microarray Gene Expression Data. J. Bioinformatics and Computational Biology 3(2): 185-206 (2005)

Hanchuan Peng, Fuhui Long, Chris H. Q. Ding: Feature Selection Based on Mutual Information: Criteria of Max-Dependency, Max-Relevance, and Min-Redundancy. IEEE Trans. Pattern Anal. Mach. Intell. 27(8): 1226-1238 (2005)

Hanchuan Peng: Image Data Mining of Fruitfly Gene Expression Patterns. CSB Workshops 2005: 352

Jie Zhou, Hanchuan Peng: Toward Automatic Annotation of in situ mRNA Expression Patterns of Drosophila Embryos. CSB Workshops 2005: 353

Fuhui Long, Hanchuan Peng, Damir Sudar, David W. Knowles, Sophie Lelièvre: Cell Phenotype Classification Based on 3D Cell Image Analysis. CSB Workshops 2005: 374

Edward Herskovits, Hanchuan Peng, Christos Davatzikos: A Bayesian morphometry algorithm. IEEE Trans. Med. Imaging 23(6): 723-737 (2004)

Victor Olman, Hanchuan Peng, Zhengchang Su, Ying Xu: Mapping of Microbial Pathways through Constrained Mapping of Orthologous Genes. CSB 2004: 363-370

Hanchuan Peng, Xiaofeng He, Fuhui Long: Automatic content extraction of filled-form images based on clustering component block projection vectors. DRR 2004: 204-214

Hanchuan Peng, Eugene W. Myers: Comparing in situ mRNA expression patterns of drosophila embryos. RECOMB 2004: 157-166

Fuhui Long, Hanchuan Peng, David Dagan Feng: Image categorization based on clustering spatial frequency maps. Storage and Retrieval Methods and Applications for Multimedia 2004: 212-222

Hanchuan Peng, Fuhui Long, Zheru Chi: Document Image Recognition Based on Template Matching of Component Block Projections. IEEE Trans. Pattern Anal. Mach. Intell. 25(9): 1188-1192 (2003)

Chris H. Q. Ding, Hanchuan Peng: Minimum Redundancy Feature Selection from Microarray Gene Expression Data. CSB 2003: 523-529

Hanchuan Peng, Chris H. Q. Ding: Structure Search and Stability Enhancement of Bayesian Networks. ICDM 2003: 621-624

Hanchuan Peng, Edward Herskovits, Christos Davatzikos: Bayesian clustering methods for morphological analysis of MR images. ISBI 2002: 875-878

Fuhui Long, David Dagan Feng, Hanchuan Peng, Wan-Chi Siu: Extracting Semantic Video Objects. IEEE Computer Graphics and Applications 21(1): 48-55 (2001)

Hanchuan Peng, Fuhui Long, Zheru Chi, Wan-Chi Siu: Document image template matching based on component block list. Pattern Recognition Letters 22(9): 1033-1042 (2001)

Hanchuan Peng, Fuhui Long: A Bayesian Learning Algorithm of Discrete Variables for Automatically Mining Irregular Features of Pattern Images. MDM/KDD 2001: 87-93

Hanchuan Peng, Zheru Chi, Wan-Chi Siu: A Semi-Parametric Hybrid Neural Model for Nonlinear Blind Signal Separation. Int. J. Neural Syst. 10(2): 79-93 (2000)

Hanchuan Peng, Fuhui Long, Wan-Chi Siu, Zheru Chi, David Dagan Feng: Document Image Matching Based on Component Blocks. ICIP 2000: 601-604