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 | 2012 | |
|---|---|---|
| c12 |      | Yanhua Sun, Gengbin Zheng, Chao Mei, Eric J. Bohm, James C. Phillips, Laximant V. Kalé, Terry R. Jones: Optimizing fine-grained communication in a biomolecular simulation application on Cray XK6. SC 2012: 55 |
| 2011 | ||
| c11 | | Chao Mei, Yanhua Sun, Gengbin Zheng, Eric J. Bohm, Laxmikant V. Kalé, James C. Phillips, Chris Harrison: Enabling and scaling biomolecular simulations of 100 million atoms on petascale machines with a multicore-optimized message-driven runtime. SC 2011: 61 |
| r1 | | Laxmikant V. Kalé, Abhinav Bhatele, Eric J. Bohm, James C. Phillips: NAMD (NAnoscale Molecular Dynamics). Encyclopedia of Parallel Computing 2011: 1249-1254 |
| 2010 | ||
| c10 | | Jeremy Enos, Craig P. Steffen, Joshi Fullop, Michael T. Showerman, Guochun Shi, Kenneth Esler, Volodymyr V. Kindratenko, John E. Stone, James C. Phillips: Quantifying the impact of GPUs on performance and energy efficiency in HPC clusters. Green Computing Conference 2010: 317-324 |
| 2009 | ||
| j9 | | James C. Phillips, John E. Stone: Probing biomolecular machines with graphics processors. Commun. ACM 52(10): 34-41 (2009) |
| j8 | | Praveen K. Chandrasekharan, Alexander Kister, James C. Phillips: Beta-sandwich - beta-barrel transformation may serve as a model of a conversion of 'normal' soluble proteins into amyloid aggregates. IJMEI 1(4): 473-489 (2009) |
| j7 | | James C. Phillips, John E. Stone: Probing Biomolecular Machines with Graphics Processors. ACM Queue 7(9): 30 (2009) |
| j6 | | Guochun Shi, Volodymyr V. Kindratenko, Ivan S. Ufimtsev, Todd J. Martinez, James C. Phillips, Steven A. Gottlieb: Implementation of scientific computing applications on the Cell Broadband Engine. Scientific Programming 17(1-2): 135-151 (2009) |
| c9 | | Volodymyr V. Kindratenko, Jeremy Enos, Guochun Shi, Michael T. Showerman, Galen W. Arnold, John E. Stone, James C. Phillips, Wen-mei W. Hwu: GPU clusters for high-performance computing. CLUSTER 2009: 1-8 |
| 2008 | ||
| j5 | | Sameer Kumar, Chao Huang, Gengbin Zheng, Eric J. Bohm, Abhinav Bhatele, James C. Phillips, Hao Yu, Laxmikant V. Kalé: Scalable molecular dynamics with NAMD on the IBM Blue Gene/L system. IBM Journal of Research and Development 52(1-2): 177-188 (2008) |
| c8 | | Abhinav Bhatele, Sameer Kumar, Chao Mei, James C. Phillips, Gengbin Zheng, Laxmikant V. Kalé: Overcoming scaling challenges in biomolecular simulations across multiple platforms. IPDPS 2008: 1-12 |
| c7 | | James C. Phillips, John E. Stone, Klaus Schulten: Adapting a message-driven parallel application to GPU-accelerated clusters. SC 2008: 8 |
| 2007 | ||
| j4 | | John E. Stone, James C. Phillips, Peter L. Freddolino, David J. Hardy, Leonardo G. Trabuco, Klaus Schulten: Accelerating molecular modeling applications with graphics processors. Journal of Computational Chemistry 28(16): 2618-2640 (2007) |
| 2006 | ||
| c6 | | David M. Kunzman, Gengbin Zheng, Eric J. Bohm, James C. Phillips, Laxmikant V. Kalé: Poster reception - Charm++ simplifies coding for the cell processor. SC 2006: 135 |
| 2005 | ||
| j3 | | James C. Phillips, Rosemary Braun, Wei Wang, James Gumbart, Emad Tajkhorshid, Elizabeth Villa, Christophe Chipot, Robert D. Skeel, Laxmikant V. Kalé, Klaus Schulten: Scalable molecular dynamics with NAMD. Journal of Computational Chemistry 26(16): 1781-1802 (2005) |
| 2002 | ||
| c5 | | James C. Phillips, Gengbin Zheng, Sameer Kumar, Laxmikant V. Kalé: NAMD: biomolecular simulation on thousands of processors. SC 2002: 1-18 |
| 2000 | ||
| j2 | | Rajeev Sharma, Michael Zeller, Vladimir Pavlovic, Thomas S. Huang, Zion Lo, Stephen M. Chu, Yunxin Zhao, James C. Phillips, Klaus Schulten: Speech/Gesture Interface to a Visual-Computing Environment. IEEE Computer Graphics and Applications 20(2): 29-37 (2000) |
| c4 | | Robert Brunner, James C. Phillips, Laxmikant V. Kalé: Scalable Molecular Dynamics for Large Biomolecular Systems. SC 2000: 45 |
| 1999 | ||
| c3 | | Laxmikant V. Kalé, Robert Brunner, James C. Phillips, Krishnan Varadarajan: Application Performance of a Linux Cluster Using Converse. IPPS/SPDP Workshops 1999: 483-495 |
| 1998 | ||
| j1 | | James C. Phillips: Algebraic Constructs for the Graphical and Computational Solution to Balancing Chemical Equations. Computers & Chemistry 22(4): 295-308 (1998) |
| 1997 | ||
| c2 | | Michael Zeller, James C. Phillips, A. Dalke, W. Humphrey, Klaus Schulten, Thomas S. Huang, Vladimir Pavlovic, Yunxin Zhao, Zion Lo, Stephen M. Chu, Rajeev Sharma: A Visual Computing Environment for Very Large Scale Biomolecular Modeling. ASAP 1997: 3- |
| c1 | | Laxmikant V. Kalé, Milind A. Bhandarkar, Robert Brunner, Neal Krawetz, James C. Phillips, Aritomo Shinozaki: NAMD: A Case Study in Multilingual Parallel Programming. LCPC 1997: 367-381 |
Colors in the list of coauthors
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