| 2012 | ||
|---|---|---|
| j23 | Fahim Mohammad, Robert M. Flight, Benjamin J. Harrison, Jeffrey C. Petruska, Eric C. Rouchka: AbsIDconvert: An absolute approach for converting genetic identifiers at different granularities. BMC Bioinformatics 13: 229 (2012) | |
| j22 | Eric C. Rouchka, Robert M. Flight, Hunter N. B. Moseley: Proceedings of the Eleventh Annual UT-ORNL-KBRIN Bioinformatics Summit 2012. BMC Bioinformatics 13(S-12): A1 (2012) | |
| j21 | Gopinath Rajadinakaran, Huifang Sun, Claire Rinehart, Eric C. Rouchka, Michael E. Smith: Regulation of cell proliferation and apoptosis by growth hormone during zebrafish auditory hair cell regeneration. BMC Bioinformatics 13(S-12): A3 (2012) | |
| j20 | Benjamin J. Harrison, Robert M. Flight, Abdallah Eteleeb, Eric C. Rouchka, Jeffrey C. Petruska: RNASeq profiling of UTR expression during neuronal plasticity. BMC Bioinformatics 13(S-12): A4 (2012) | |
| c14 | Ernur Saka, Eric C. Rouchka: Poster: Image registration and visualization tool for in-situ gene expression images. ICCABS 2012: 1 | |
| 2011 | ||
| j19 | Eric C. Rouchka, Robert M. Flight, Ramin Homayouni: Proceedings of the Tenth Annual UT-ORNL-KBRIN Bioinformatics Summit 2011. BMC Bioinformatics 12(S-7): A1 (2011) | |
| j18 | Robert M. Flight, Jeffrey C. Petruska, Benjamin J. Harrison, Eric C. Rouchka: categoryCompare: high-throughput data meta-analysis using gene annotations. BMC Bioinformatics 12(S-7): A16 (2011) | |
| j17 | John Kirtley, Eric C. Rouchka, Robert M. Flight, Palaniappan Sethu, John W. Eaton, Robert S. Keynton: Meta-analysis of gene expression changes in response to radiation exposure. BMC Bioinformatics 12(S-7): A20 (2011) | |
| j16 | Dazhuo Li, Eric C. Rouchka: Integrative biclustering of heterogeneous datasets using a Bayesian nonparametric model with application to chemogenomics. BMC Bioinformatics 12(S-7): A6 (2011) | |
| j15 | Rami N. Mahdi, Eric C. Rouchka: Reduced HyperBF Networks: Regularization by Explicit Complexity Reduction and Scaled Rprop-Based Training. IEEE Transactions on Neural Networks 22(5): 673-686 (2011) | |
| c13 | Fahim Mohammad, Robert M. Flight, Benjamin J. Harrison, Jeffrey C. Petruska, Eric C. Rouchka: A Heuristic Algorithm for Detecting Intercellular Interactions. BIBE 2011: 1-8 | |
| c12 | Fahim Mohammad, Robert M. Flight, Benjamin J. Harrison, Jeffrey C. Petruska, Eric C. Rouchka: Interval Trees for Detection of Overlapping Genetic Entities. BIBE 2011: 278-281 | |
| 2010 | ||
| j14 | Christy M. Gearheart, Benjamin Arazi, Eric C. Rouchka: DNA-based random number generation in security circuitry. Biosystems 100(3): 208-214 (2010) | |
| j13 | Eric C. Rouchka, Robert M. Flight, Claire Rinehart: Proceedings of the ninth annual UT-ORNL-KBRIN Bioinformatics Summit 2010. BMC Bioinformatics 11(S-4): I1 (2010) | |
| j12 | Bing Wang, Fahim Mohammad, Jun Zhang, Xinmin Yin, Eric C. Rouchka, Xiang Zhang: Statistical analysis of multiple significance test methods for differential proteomics. BMC Bioinformatics 11(S-4): P30 (2010) | |
| j11 | Christy M. Gearheart, Eric C. Rouchka, Benjamin Arazi: Design of a DNA-based shift register. BMC Bioinformatics 11(S-4): P31 (2010) | |
| j10 | Eric C. Rouchka, Diego E. Montoya-Durango, Vilius Stribinskis, Kenneth S. Ramos, Ted Kalbfleisch: Assessment of genetic variation for the LINE-1 retrotransposon from next generation sequence data. BMC Bioinformatics 11(S-9): S12 (2010) | |
| c11 | Dazhuo Li, Eric C. Rouchka, Patrick Shafto: Phylogenomic Analysis Using Bayesian Congruence Measuring. BICoB 2010: 30-37 | |
| c10 | Dazhuo Li, Fahim Mohammad, Eric C. Rouchka: A Bayesian Nonparametric Model for Joint Relation Integration and Domain Clustering. ICMLA 2010: 969-974 | |
| 2009 | ||
| j9 | Eric C. Rouchka, Julia Krushkal: Proceedings of the Eighth Annual UT-ORNL-KBRIN Bioinformatics Summit 2009. BMC Bioinformatics 10(S-7) (2009) | |
| c9 | Eric C. Rouchka, Xiangping Wang, James H. Graham, Nigel G. F. Cooper: Computational Prediction of Genes Translationally Regulated by Cytoplasmic Polyadenylation Elements. BICoB 2009: 353-361 | |
| c8 | Rami N. Mahdi, Eric C. Rouchka: Feature Selection in Cancer Classification from mRNA Data Based on Localized Dimension Reduction. ICMLA 2009: 443-448 | |
| c7 | Dar-Jen Chang, Ahmed H. Desoky, Ming Ouyang, Eric C. Rouchka: Compute Pairwise Manhattan Distance and Pearson Correlation Coefficient of Data Points with GPU. SNPD 2009: 501-506 | |
| 2008 | ||
| j8 | Christy M. Bogard, Eric C. Rouchka, Benjamin Arazi: Random number generation for DNA-based security circuitry. BMC Bioinformatics 9(S-7) (2008) | |
| j7 | Rami N. Mahdi, Eric C. Rouchka: Buffered codons in human transcriptional units. BMC Bioinformatics 9(S-7) (2008) | |
| j6 | Joseph Morris, Eric C. Rouchka, David Schultz: Techniques for the analysis of trichome Pelagonium xhortorum expressed sequence tags. BMC Bioinformatics 9(S-7) (2008) | |
| j5 | Eric C. Rouchka, Julia Krushkal, Daniel Goldowitz: Proceedings of the Seventh Annual UT-ORNL-KBRIN Bioinformatics Summit 2008. BMC Bioinformatics 9(S-7) (2008) | |
| c6 | Rami N. Mahdi, Eric C. Rouchka: Model Based Unsupervised Learning Guided by Abundant Background Samples. ICMLA 2008: 203-210 | |
| 2007 | ||
| j4 | Eric C. Rouchka, C. Timothy Hardin: rMotifGen: random motif generator for DNA and protein sequences. BMC Bioinformatics 8 (2007) | |
| c5 | Kuo-Chen Li, Dar-Jen Chang, Eric C. Rouchka, Yuan Yan Chen: Biological Sequence Mining Using Plausible Neural Network and its Application to Exon/intron Boundaries Prediction. CIBCB 2007: 165-169 | |
| 2006 | ||
| j3 | ||
| 2005 | ||
| j2 | Eric C. Rouchka, Abdelnaby Khalyfa, Nigel G. F. Cooper: MPrime: efficient large scale multiple primer and oligonucleotide design for customized gene microarrays. BMC Bioinformatics 6: 175 (2005) | |
| c4 | I. Elizabeth Cha, Eric C. Rouchka: Comparison of Current BLAST Software on Nucleotide Sequences. IPDPS 2005 | |
| 2003 | ||
| j1 | William A. Thompson, Eric C. Rouchka, Charles E. Lawrence: Gibbs Recursive Sampler: finding transcription factor binding sites. Nucleic Acids Research 31(13): 3580-3585 (2003) | |
| 2000 | ||
| c3 | Zhengyan Kan, Warren Gish, Eric C. Rouchka, Jarret Glasscock, David J. States: UTR Reconstruction and Analysis Using Genomically Aligned EST Sequences. ISMB 2000: 218-227 | |
| 1999 | ||
| c2 | Thomas W. Blackwell, Eric C. Rouchka, David J. States: Identity by Descent Genome Segmentation Based on Single Nucleotide Polymorphism Distributions. ISMB 1999: 54-59 | |
| 1998 | ||
| c1 | Eric C. Rouchka, David J. States: Sequence Assembly Validation by Multiple Restriction Digest Fragment Coverage Analysis. ISMB 1998: 140-147 | |
Colors in the list of coauthors
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