Andreas Ruepp

Hans-Werner Mewes, Andreas Ruepp, Fabian J. Theis, Thomas Rattei, Mathias C. Walter, Dmitrij Frishman, Karsten Suhre, Manuel Spannagl, Klaus F. X. Mayer, Volker Stümpflen, Alexey V. Antonov: MIPS: curated databases and comprehensive secondary data resources in 2010. Nucleic Acids Research 39(Database-Issue): 220-224 (2011)

Andreas Ruepp, Brigitte Waegele, Martin Lechner, Barbara Brauner, Irmtraud Dunger-Kaltenbach, Gisela Fobo, Goar Frishman, Corinna Montrone, Hans-Werner Mewes: CORUM: the comprehensive resource of mammalian protein complexes - 2009. Nucleic Acids Research 38(Database-Issue): 497-501 (2010)

Pawel Smialowski, Philipp Pagel, Philip Wong, Barbara Brauner, Irmtraud Dunger, Gisela Fobo, Goar Frishman, Corinna Montrone, Thomas Rattei, Dmitrij Frishman, Andreas Ruepp: The Negatome database: a reference set of non-interacting protein pairs. Nucleic Acids Research 38(Database-Issue): 540-544 (2010)

Brigitte Waegele, Irmtraud Dunger-Kaltenbach, Gisela Fobo, Corinna Montrone, Hans-Werner Mewes, Andreas Ruepp: CRONOS: the cross-reference navigation server. Bioinformatics 25(1): 141-143 (2009)

Hans-Werner Mewes, Sabine Dietmann, Dmitrij Frishman, Richard Gregory, Gertrud Mannhaupt, Klaus F. X. Mayer, Martin Münsterkötter, Andreas Ruepp, Manuel Spannagl, Volker Stümpflen, Thomas Rattei: MIPS: analysis and annotation of genome information in 2007. Nucleic Acids Research 36(Database-Issue): 196-201 (2008)

Andreas Ruepp, Barbara Brauner, Irmtraud Dunger-Kaltenbach, Goar Frishman, Corinna Montrone, Michael Stransky, Brigitte Waegele, Thorsten Schmidt, Octave Noubibou Doudieu, Volker Stümpflen, Hans-Werner Mewes: CORUM: the comprehensive resource of mammalian protein complexes. Nucleic Acids Research 36(Database-Issue): 646-650 (2008)

Brigitte Waegele, Thorsten Schmidt, Hans-Werner Mewes, Andreas Ruepp: OREST: the online resource for EST analysis. Nucleic Acids Research 36(Web-Server-Issue): 140-144 (2008)

Hans-Werner Mewes, Dmitrij Frishman, Klaus F. X. Mayer, Martin Münsterkötter, Octave Noubibou, Philipp Pagel, Thomas Rattei, Matthias Oesterheld, Andreas Ruepp, Volker Stümpflen: MIPS: analysis and annotation of proteins from whole genomes in 2005. Nucleic Acids Research 34(Database-Issue): 169-172 (2006)

Ulrich Güldener, Martin Münsterkötter, Matthias Oesterheld, Philipp Pagel, Andreas Ruepp, Hans-Werner Mewes, Volker Stümpflen: MPact: the MIPS protein interaction resource on yeast. Nucleic Acids Research 34(Database-Issue): 436-441 (2006)

Andreas Ruepp, Octave Noubibou Doudieu, Jos van den Oever, Barbara Brauner, Irmtraud Dunger-Kaltenbach, Gisela Fobo, Goar Frishman, Corinna Montrone, Christine Skornia, Steffi Wanka, Thomas Rattei, Philipp Pagel, M. Louise Riley, Dmitrij Frishman, Dimitrij Surmeli, Igor V. Tetko, Matthias Oesterheld, Volker Stümpflen, Hans-Werner Mewes: The Mouse Functional Genome Database (MfunGD): functional annotation of proteins in the light of their cellular context. Nucleic Acids Research 34(Database-Issue): 568-571 (2006)

Holger Prokisch, Christophe Andreoli, U. Ahting, K. Heiss, Andreas Ruepp, Curt Scharfe, Thomas Meitinger: MitoP2: the mitochondrial proteome database - now including mouse data. Nucleic Acids Research 34(Database-Issue): 705-711 (2006)

Philipp Pagel, Stefan Kovac, Matthias Oesterheld, Barbara Brauner, Irmtraud Dunger-Kaltenbach, Goar Frishman, Corinna Montrone, Pekka Mark, Volker Stümpflen, Hans-Werner Mewes, Andreas Ruepp, Dmitrij Frishman: The MIPS mammalian protein?Cprotein interaction database. Bioinformatics 21(6): 832-834 (2005)

Igor V. Tetko, Barbara Brauner, Irmtraud Dunger-Kaltenbach, Goar Frishman, Corinna Montrone, Gisela Fobo, Andreas Ruepp, Alexey V. Antonov, Dimitrij Surmeli, Hans-Werner Mewes: MIPS bacterial genomes functional annotation benchmark dataset. Bioinformatics 21(10): 2520-2521 (2005)

Igor V. Tetko, Axel Facius, Andreas Ruepp, Hans-Werner Mewes: Super paramagnetic clustering of protein sequences. BMC Bioinformatics 6: 82 (2005)

Hans-Werner Mewes, C. Amid, Roland Arnold, Dmitrij Frishman, Ulrich Güldener, Gertrud Mannhaupt, Martin Münsterkötter, Philipp Pagel, Normann Strack, Volker Stümpflen, Jens Warfsmann, Andreas Ruepp: MIPS: analysis and annotation of proteins from whole genomes. Nucleic Acids Research 32(Database-Issue): 41-44 (2004)