Leszek Rychlewski

Dariusz Plewczynski, Michal Lazniewski, Marcin von Grotthuss, Leszek Rychlewski, Krzysztof Ginalski: VoteDock: Consensus docking method for prediction of protein-ligand interactions. Journal of Computational Chemistry 32(4): 568-581 (2011)

Cathryn M. Gould, Francesca Diella, Allegra Via, Pål Puntervoll, Christine Gemünd, Sophie Chabanis-Davidson, Sushama Michael, Ahmed Sayadi, Jan Christian Bryne, Claudia Chica, Markus Seiler, Norman E. Davey, Niall J. Haslam, Robert J. Weatheritt, Aidan Budd, Tim Hughes, Jakub Pas, Leszek Rychlewski, Gilles Travé, Rein Aasland, Manuela Helmer-Citterich, Rune Linding, Toby J. Gibson: ELM: the status of the 2010 eukaryotic linear motif resource. Nucleic Acids Research 38(Database-Issue): 167-180 (2010)

Marcin von Grotthuss, Dariusz Plewczynski, Gert Vriend, Leszek Rychlewski: 3D-Fun: predicting enzyme function from structure. Nucleic Acids Research 36(Web-Server-Issue): 303-307 (2008)

Lukasz Slabinski, Lukasz Jaroszewski, Leszek Rychlewski, Ian A. Wilson, Scott A. Lesley, Adam Godzik: XtalPred: a web server for prediction of protein crystallizability. Bioinformatics 23(24): 3403-3405 (2007)

László Kaján, Leszek Rychlewski: Evaluation of 3D-Jury on CASP7 models. BMC Bioinformatics 8 (2007)

Lukasz Slabinski, Adam Godzik, Leszek Rychlewski: TOM - Task and Object Management for Grid Clusters. GCA 2007: 199-205

Marcin von Grotthuss, Dariusz Plewczynski, Krzysztof Ginalski, Leszek Rychlewski, Eugene I. Shakhnovich: PDB-UF: database of predicted enzymatic functions for unannotated protein structures from structural genomics. BMC Bioinformatics 7: 53 (2006)

Dariusz Plewczynski, Adrian Tkacz, Lucjan Stanislaw Wyrwicz, Leszek Rychlewski: AutoMotif server: prediction of single residue post-translational modifications in proteins. Bioinformatics 21(10): 2525-2527 (2005)

Lukasz Jaroszewski, Leszek Rychlewski, Zhanwen Li, Weizhong Li, Adam Godzik: FFAS03: a server for profile-profile sequence alignments. Nucleic Acids Research 33(Web-Server-Issue): 284-288 (2005)

Daniel Fischer, Jakub Pas, Leszek Rychlewski: The PDB-Preview database: a repository of in-silico models of 'on-hold' PDB entries. Bioinformatics 20(15): 2482-2484 (2004)

Dariusz Plewczynski, Leszek Rychlewski, Yuzhen Ye, Lukasz Jaroszewski, Adam Godzik: Integrated web service for improving alignment quality based on segments comparison. BMC Bioinformatics 5: 98 (2004)

Krzysztof Ginalski, Marcin von Grotthuss, Nick V. Grishin, Leszek Rychlewski: Detecting distant homology with Meta-BASIC. Nucleic Acids Research 32(Web-Server-Issue): 576-581 (2004)

Krzysztof Ginalski, Arne Elofsson, Daniel Fischer, Leszek Rychlewski: 3D-Jury: A Simple Approach to Improve Protein Structure Predictions. Bioinformatics 19(8): 1015-1018 (2003)

Marcin von Grotthuss, Jakub Pas, Leszek Rychlewski: Ligand-Info, Searching for Similar Small Compounds Using Index Profiles. Bioinformatics 19(8): 1041-1042 (2003)

Krzysztof Ginalski, Leszek Rychlewski: Detection of reliable and unexpected protein fold predictions using 3D-Jury. Nucleic Acids Research 31(13): 3291-3292 (2003)

Pål Puntervoll, Rune Linding, Christine Gemünd, Sophie Chabanis-Davidson, Morten Mattingsdal, Scott Cameron, David M. A. Martin, Gabriele Ausiello, Barbara Brannetti, Anna Costantini, Fabrizio Ferrè, Vincenza Maselli, Allegra Via, Gianni Cesareni, Francesca Diella, Giulio Superti-Furga, Lucjan Stanislaw Wyrwicz, Chenna Ramu, Caroline McGuigan, Rambabu Gudavalli, Ivica Letunic, Peer Bork, Leszek Rychlewski, Bernhard Küster, Manuela Helmer-Citterich, William N. Hunter, Rein Aasland, Toby J. Gibson: ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins. Nucleic Acids Research 31(13): 3625-3630 (2003)

Krzysztof Ginalski, Jakub Pas, Lucjan Stanislaw Wyrwicz, Marcin von Grotthuss, Janusz M. Bujnicki, Leszek Rychlewski: ORFeus: detection of distant homology using sequence profiles and predicted secondary structure. Nucleic Acids Research 31(13): 3804-3807 (2003)

Janusz M. Bujnicki, Leszek Rychlewski, Daniel Fischer: Fold-recognition detects an error in the Protein Data Bank. Bioinformatics 18(10): 1391-1395 (2002)

Janusz M. Bujnicki, Leszek Rychlewski: RNA: (guanine-N2) methyltransferases RsmC/RsmD and their homologs revisited - bioinformatic analysis and prediction of the active site based on the uncharacterized Mj0882 protein structure. BMC Bioinformatics 3: 10 (2002)

Janusz M. Bujnicki, Arne Elofsson, Daniel Fischer, Leszek Rychlewski: Structure prediction meta server. Bioinformatics 17(8): 750-751 (2001)

Leszek Rychlewski: ToolShop: prerelease inspections for protein structure prediction servers. Bioinformatics 17(12): 1240-1241 (2001)

Janusz M. Bujnicki, Marcin Feder, Monika Radlinska, Leszek Rychlewski: mRNA: guanine-N7 cap methyltransferases: identification of novel members of the family, evolutionary analysis, homology modeling, and analysis of sequence-structure-function relationships. BMC Bioinformatics 2: 2 (2001)

Susana Cristobal, Adam Zemla, Daniel Fischer, Leszek Rychlewski, Arne Elofsson: A study of quality measures for protein threading models. BMC Bioinformatics 2: 5 (2001)

Naomi Siew, Arne Elofsson, Leszek Rychlewski, Daniel Fischer: MaxSub: an automated measure for the assessment of protein structure prediction quality. Bioinformatics 16(9): 776-785 (2000)

Krzysztof Pawlowski, Leszek Rychlewski, John C. Reed, Adam Godzik: From Fold to Function Predictions: An Apoptosis Regulator Protein BID. Computers & Chemistry 24(3-4): 511-517 (2000)