Matthew C. Schmidt

Matthew C. Schmidt, Andrea M. Rocha, Kanchana Padmanabhan, Yekaterina Shpanskaya, Jillian F. Banfield, Kathleen Scott, James R. Mihelcic, Nagiza F. Samatova: NIBBS-Search for Fast and Accurate Prediction of Phenotype-Biased Metabolic Systems. PLoS Computational Biology 8(5) (2012)

Vineet Mehta, Feanil Patel, Yan Glina, Matthew C. Schmidt, Benjamin A. Miller, Nadya Travinin Bliss: Characterization of traffic and structure in the U.S. airport network. CIDU 2012: 124-129

Benjamin A. Miller, Nicholas Arcolano, Michelle S. Beard, Jeremy Kepner, Matthew C. Schmidt, Nadya T. Bliss, Patrick J. Wolfe: A scalable signal processing architecture for massive graph analysis. ICASSP 2012: 5329-5332

Matthew C. Schmidt, Andrea M. Rocha, Kanchana Padmanabhan, Zhengzhang Chen, Kathleen Scott, James R. Mihelcic, Nagiza F. Samatova: Efficient alpha, beta-motif Finder for Identification of Phenotype-related Functional Modules. BMC Bioinformatics 12: 440 (2011)

Wenbin Chen, Matthew C. Schmidt, Nagiza F. Samatova: On the parameterized complexity of the Multi-MCT and Multi-MCST problems. J. Comb. Optim. 21(2): 151-158 (2011)

William Hendrix, Matthew C. Schmidt, Paul Breimyer, Nagiza F. Samatova: Theoretical underpinnings for maximal clique enumeration on perturbed graphs. Theor. Comput. Sci. 411(26-28): 2520-2536 (2010)

Wenhong Tian, Matthew C. Schmidt, Wenbin Chen, Nagiza F. Samatova: Multiple Alignment of Large Interaction Networks by Fast Identifying Maximal Conserved Patterns. BIOCOMP 2010: 178-184

Wenbin Chen, Andrea M. Rocha, William Hendrix, Matthew C. Schmidt, Nagiza F. Samatova: The Multiple Alignment Algorithm for Metabolic Pathways without Abstraction. ICDM Workshops 2010: 669-678

Matthew C. Schmidt, Nagiza F. Samatova, Kevin Thomas, Byung-Hoon Park: A scalable, parallel algorithm for maximal clique enumeration. J. Parallel Distrib. Comput. 69(4): 417-428 (2009)

Wenbin Chen, Matthew C. Schmidt, Nagiza F. Samatova: On parameterized complexity of the Multi-MCS problem. Theor. Comput. Sci. 410(21-23): 2024-2032 (2009)

Matthew C. Schmidt, Nagiza F. Samatova: An Algorithm for the Discovery of Phenotype Related Metabolic Pathways. BIBM 2009: 60-65

Wenbin Chen, Matthew C. Schmidt, Wenhong Tian, Nagiza F. Samatova: A Fast, Accurate Algorithm for Identifying Functional Modules Through Pairwise Local Alignment of Protein Interaction Networks. BIOCOMP 2009: 816-821

William Hendrix, Matthew C. Schmidt, Paul Breimyer, Nagiza F. Samatova: On perturbation theory and an algorithm for maximal clique enumeration in uncertain and noisy graphs. KDD Workshop on Knowledge Discovery from Uncertain Data 2009: 48-56

Byung-Hoon Park, Matthew C. Schmidt, Kevin Thomas, Tatiana V. Karpinets, Nagiza F. Samatova: Parallel, scalable, memory-efficient backtracking for combinatoria modeling of large-scale biological systems. IPDPS 2008: 1-8