| 2013 | ||
|---|---|---|
| c22 | Matthias Kauer, Sebastian Steinhorst, Dip Goswami, Reinhard Schneider, Martin Lukasiewycz, Samarjit Chakraborty: Formal verification of distributed controllers using Time-Stamped Event Count Automata. ASP-DAC 2013: 411-416 | |
| c21 | Reinhard Schneider, Licong Zhang, Dip Goswami, Alejandro Masrur, Samarjit Chakraborty: Compositional analysis of switched ethernet topologies. DATE 2013: 1099-1104 | |
| c20 | Dip Goswami, Alejandro Masrur, Reinhard Schneider, Chun Jason Xue, Samarjit Chakraborty: Multirate controller design for resource- and schedule-constrained automotive ECUs. DATE 2013: 1123-1126 | |
| 2012 | ||
| j29 | Theodoros G. Soldatos, Seán I. O'Donoghue, Venkata P. Satagopam, Adriano Barbosa-Silva, Georgios A. Pavlopoulos, Ana Carolina Wanderley-Nogueira, Nina da Mota Soares-Cavalcanti, Reinhard Schneider: Caipirini: using gene sets to rank literature. BioData Mining 5: 1 (2012) | |
| j28 | Enrico Glaab, Reinhard Schneider: PathVar: analysis of gene and protein expression variance in cellular pathways using microarray data. Bioinformatics 28(3): 446-447 (2012) | |
| j27 | Enrico Glaab, Anaïs Baudot, Natalio Krasnogor, Reinhard Schneider, Alfonso Valencia: EnrichNet: network-based gene set enrichment analysis. Bioinformatics 28(18): 451-457 (2012) | |
| j26 | Ernesto Iacucci, Léon-Charles Tranchevent, Dusan Popovic, Georgios A. Pavlopoulos, Bart De Moor, Reinhard Schneider, Yves Moreau: ReLiance: a machine learning and literature-based prioritization of receptor - ligand pairings. Bioinformatics 28(18): 569-574 (2012) | |
| j25 | Burkhard Rost, Terry Gaasterland, Thomas Lengauer, Michal Linial, Scott Markel, B. J. Morrison McKay, Reinhard Schneider, Paul Horton, Janet Kelso: Paving the future: finding suitable ISMB venues. Bioinformatics 28(19): 2556-2559 (2012) | |
| j24 | Maria Secrier, Georgios A. Pavlopoulos, Jan Aerts, Reinhard Schneider: Arena3D: visualizing time-driven phenotypic differences in biological systems. BMC Bioinformatics 13: 45 (2012) | |
| j23 | Ernesto Iacucci, Léon-Charles Tranchevent, Dusan Popovic, Georgios A. Pavlopoulos, Bart De Moor, Reinhard Schneider, Yves Moreau: A bioinformatics e-dating story: computational prediction and prioritization of receptor-ligand pairs. BMC Bioinformatics 13(S-18): A7 (2012) | |
| j22 | Francisco Azuaje, Michaël Heymann, Anne-Marie Ternes, Anke Wienecke-Baldacchino, Daniel Struck, Danièle Moes, Reinhard Schneider: Bioinformatics as a driver, not a passenger, of translational biomedical research: Perspectives from the 6th Benelux bioinformatics conference. J. Clinical Bioinformatics 2: 7 (2012) | |
| j21 | Manuel Corpas, Segun A. Fatumo, Reinhard Schneider: How Not to Be a Bioinformatician. Source Code for Biology and Medicine 7: 3 (2012) | |
| c19 | Martin Lukasiewycz, Reinhard Schneider, Dip Goswami, Samarjit Chakraborty: Modular scheduling of distributed heterogeneous time-triggered automotive systems. ASP-DAC 2012: 665-670 | |
| c18 | Harald Voit, Anuradha Annaswamy, Reinhard Schneider, Dip Goswami, Samarjit Chakraborty: Adaptive switching controllers for tracking with hybrid communication protocols. CDC 2012: 4121-4126 | |
| c17 | Dip Goswami, Martin Lukasiewycz, Reinhard Schneider, Samarjit Chakraborty: Time-triggered implementations of mixed-criticality automotive software. DATE 2012: 1227-1232 | |
| c16 | Reinhard Schneider, Dip Goswami, Alejandro Masrur, Samarjit Chakraborty: QoC-oriented efficient schedule synthesis for mixed-criticality cyber-physical systems. FDL 2012: 60-67 | |
| c15 | Laurent Lefèvre, Vicente Martin, Miguel A. Ordonez, Johnatan E. Pecero, Jean-Marc Pierson, Jesús Carretero, Pascal Bouvry, David R. C. Hill, Jesús Labarta, Reinhard Schneider, James C. Sexton, Mads Nygård, Gorka Esnal Lopez, Maria Mirto, Marco Passante, Giovanni Aloisio, Carsten Trinitis, Alexander Heinecke, Lamia Djoudi: HPCS 2012 panels: Panel I: Energy efficient systems in next generation high performance data and compute centers. HPCS 2012 | |
| c14 | Dip Goswami, Reinhard Schneider, Alejandro Masrur, Martin Lukasiewycz, Samarjit Chakraborty, Harald Voit, Anuradha Annaswamy: Challenges in automotive cyber-physical systems design. ICSAMOS 2012: 346-354 | |
| 2011 | ||
| j20 | Georgios A. Pavlopoulos, Maria Secrier, Charalampos N. Moschopoulos, Theodoros G. Soldatos, Sophia Kossida, Jan Aerts, Reinhard Schneider, Pantelis G. Bagos: Using graph theory to analyze biological networks. BioData Mining 4: 10 (2011) | |
| j19 | Robbie P. Joosten, Tim A. H. te Beek, Elmar Krieger, Maarten L. Hekkelman, Rob W. W. Hooft, Reinhard Schneider, Chris Sander, Gert Vriend: A series of PDB related databases for everyday needs. Nucleic Acids Research 39(Database-Issue): 411-419 (2011) | |
| c13 | Dip Goswami, Reinhard Schneider, Samarjit Chakraborty: Co-design of cyber-physical systems via controllers with flexible delay constraints. ASP-DAC 2011: 225-230 | |
| c12 | Reinhard Schneider, Dip Goswami, Sohaib Zafar, Martin Lukasiewycz, Samarjit Chakraborty: Constraint-driven synthesis and tool-support for FlexRay-based automotive control systems. CODES+ISSS 2011: 139-148 | |
| c11 | Reinhard Schneider, Dip Goswami, Samarjit Chakraborty, Unmesh D. Bordoloi, Petru Eles, Zebo Peng: On the quantification of sustainability and extensibility of FlexRay schedules. DAC 2011: 375-380 | |
| c10 | Dip Goswami, Reinhard Schneider, Samarjit Chakraborty: Re-engineering cyber-physical control applications for hybrid communication protocols. DATE 2011: 914-919 | |
| c9 | Alejandro Masrur, Dip Goswami, Reinhard Schneider, Harald Voit, Anuradha Annaswamy, Samarjit Chakraborty: Schedulability analysis of distributed cyber-physical applications on mixed time-/event-triggered bus architectures with retransmissions. SIES 2011: 266-273 | |
| 2010 | ||
| j18 | Georgios A. Pavlopoulos, Theodoros G. Soldatos, Adriano Barbosa-Silva, Reinhard Schneider: A reference guide for tree analysis and visualization. BioData Mining 3: 1 (2010) | |
| j17 | Adriano Barbosa-Silva, Theodoros G. Soldatos, Ivan L. F. Magalhães, Georgios A. Pavlopoulos, Jean-Fred Fontaine, Miguel A. Andrade-Navarro, Reinhard Schneider, J. Miguel Ortega: LAITOR - Literature Assistant for Identification of Terms co-Occurrences and Relationships. BMC Bioinformatics 11: 70 (2010) | |
| j16 | Allyson L. Lister, Ruchira S. Datta, Oliver Hofmann, Roland Krause, Michael Kuhn, Bettina Roth, Reinhard Schneider: Live Coverage of Intelligent Systems for Molecular Biology/European Conference on Computational Biology (ISMB/ECCB) 2009. PLoS Computational Biology 6(1) (2010) | |
| j15 | Allyson L. Lister, Ruchira S. Datta, Oliver Hofmann, Roland Krause, Michael Kuhn, Bettina Roth, Reinhard Schneider: Live Coverage of Scientific Conferences Using Web Technologies. PLoS Computational Biology 6(1) (2010) | |
| j14 | Seán I. O'Donoghue, Heiko Horn, Evangelos Pafilis, Sven Haag, Michael Kuhn, Venkata P. Satagopam, Reinhard Schneider, Lars Juhl Jensen: Reflect: A practical approach to web semantics. J. Web Sem. 8(2-3): 182-189 (2010) | |
| c8 | Linh Thi Xuan Phan, Reinhard Schneider, Samarjit Chakraborty, Insup Lee: Modeling buffers with data refresh semantics in automotive architectures. EMSOFT 2010: 119-128 | |
| c7 | Reinhard Schneider, Unmesh D. Bordoloi, Dip Goswami, Samarjit Chakraborty: Optimized Schedule Synthesis under Real-Time Constraints for the Dynamic Segment of FlexRay. EUC 2010: 31-38 | |
| c6 | Harald Voit, Reinhard Schneider, Dip Goswami, Anuradha Annaswamy, Samarjit Chakraborty: Optimizing Hierarchical Schedules for Improved Control Performance. SIES 2010: 9-17 | |
| 2009 | ||
| j13 | Georgios A. Pavlopoulos, Evangelos Pafilis, Michael Kuhn, Sean D. Hooper, Reinhard Schneider: OnTheFly: a tool for automated document-based text annotation, data linking and network generation. Bioinformatics 25(7): 977-978 (2009) | |
| j12 | Georgios A. Pavlopoulos, Charalampos N. Moschopoulos, Sean D. Hooper, Reinhard Schneider, Sophia Kossida: jClust: a clustering and visualization toolbox. Bioinformatics 25(15): 1994-1996 (2009) | |
| j11 | Charalampos N. Moschopoulos, Georgios A. Pavlopoulos, Reinhard Schneider, Spiridon D. Likothanassis, Sophia Kossida: GIBA: a clustering tool for detecting protein complexes. BMC Bioinformatics 10(S-6) (2009) | |
| j10 | Allyson L. Lister, Ruchira S. Datta, Oliver Hofmann, Roland Krause, Michael Kuhn, Bettina Roth, Reinhard Schneider: Live Coverage of Scientific Conferences Using Web Technologies. PLoS Computational Biology 5(11) (2009) | |
| 2008 | ||
| j9 | Georgios A. Pavlopoulos, Anna-Lynn Wegener, Reinhard Schneider: A survey of visualization tools for biological network analysis. BioData Mining 1 (2008) | |
| j8 | Adriano Barbosa-Silva, Venkata P. Satagopam, Reinhard Schneider, J. Miguel Ortega: Clustering of cognate proteins among distinct proteomes derived from multiple links to a single seed sequence. BMC Bioinformatics 9 (2008) | |
| j7 | Stefan Günther, Michael Kuhn, Mathias Dunkel, Monica Campillos, Christian Senger, Evangelia Petsalaki, Jessica Ahmed, Eduardo Garcia Urdiales, Andreas Gewiess, Lars Juhl Jensen, Reinhard Schneider, Roman Skoblo, Robert B. Russell, Philip E. Bourne, Peer Bork, Robert Preissner: SuperTarget and Matador: resources for exploring drug-target relationships. Nucleic Acids Research 36(Database-Issue): 919-922 (2008) | |
| 2002 | ||
| c5 | ||
| 2000 | ||
| c4 | Reinhard Schneider, Reinhold Weiss: Hardware Support for Simulated Annealing and Tabu Search. IPDPS Workshops 2000: 660-670 | |
| 1999 | ||
| e1 | Thomas Lengauer, Reinhard Schneider, Peer Bork, Douglas L. Brutlag, Janice I. Glasgow, Hans-Werner Mewes, Ralf Zimmer (Eds.): Proceedings of the Seventh International Conference on Intelligent Systems for Molecular Biology, August 6-10, 1999, Heidelberg, Germany. AAAI 1999, isbn 1-57735-083-9 | |
| 1998 | ||
| j6 | Chris Dodge, Reinhard Schneider, Chris Sander: The HSSP database of protein structure-sequence alignments and family profiles. Nucleic Acids Research 26(1): 313-315 (1998) | |
| 1997 | ||
| j5 | Miguel A. Andrade, Georg Casari, Antoine de Daruvar, Chris Sander, Reinhard Schneider, Javier Tamames, Alfonso Valencia, Christos A. Ouzounis: Sequence analysis of the Methanococcus jannaschii genome and the prediction of protein function. Computer Applications in the Biosciences 13(4): 481-483 (1997) | |
| j4 | Reinhard Schneider, Antoine de Daruvar, Chris Sander: The HSSP database of protein structure-sequence alignments. Nucleic Acids Research 25(1): 226-230 (1997) | |
| 1996 | ||
| j3 | Reinhard Schneider, Chris Sander: The HSSP database of protein structure-sequence alignments. Nucleic Acids Research 24(1): 201-205 (1996) | |
| 1994 | ||
| j2 | Burkhard Rost, Chris Sander, Reinhard Schneider: PHD - an automatic mail server for protein secondary structure prediction. Computer Applications in the Biosciences 10(1): 53-60 (1994) | |
| c3 | Burkhard Rost, Chris Sander, Reinhard Schneider: Evolution and Neural Networks - Protein Secondary Structure Prediction Above 71% Accuracy. HICSS (5) 1994: 385-394 | |
| c2 | Michael Scharf, Reinhard Schneider, Georg Casari, Peer Bork, Alfonso Valencia, Christos A. Ouzounis, Chris Sander: GeneQuiz: A Workbench for Sequence Analysis. ISMB 1994: 348-353 | |
| 1993 | ||
| j1 | Chris Sander, Reinhard Schneider: The HSSP data base of protein structure-sequence alignments. Nucleic Acids Research 21(13): 3105-3109 (1993) | |
| 1992 | ||
| c1 | Chris Sander, Reinhard Schneider, Pieter F. W. Stouten: The Human Genome and High Performance Computing in Molecular Biology. Supercomputer 1992: 32-48 | |
Colors in the list of coauthors
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