Dietmar Schomburg

Ida Schomburg, Antje Chang, Sandra Placzek, Carola Söhngen, Michael Rother, Maren Lang, Cornelia Munaretto, Susanne Ulas, Michael Stelzer, Andreas Grote, Maurice Scheer, Dietmar Schomburg: BRENDA in 2013: integrated reactions, kinetic data, enzyme function data, improved disease classification: new options and contents in BRENDA. Nucleic Acids Research 41(Database-Issue): 764-772 (2013)

Carola Söhngen, Antje Chang, Dietmar Schomburg: Development of an automatic Classification Scheme for Disease-related Enzyme Information. BMC Bioinformatics 12: 329 (2011)

Susanne Quester, Dietmar Schomburg: EnzymeDetector: an integrated enzyme function prediction tool and database. BMC Bioinformatics 12: 376 (2011)

Marion Gremse, Antje Chang, Ida Schomburg, Andreas Grote, Maurice Scheer, Christian Ebeling, Dietmar Schomburg: The BRENDA Tissue Ontology (BTO): the first all-integrating ontology of all organisms for enzyme sources. Nucleic Acids Research 39(Database-Issue): 507-513 (2011)

Maurice Scheer, Andreas Grote, Antje Chang, Ida Schomburg, Cornelia Munaretto, Michael Rother, Carola Söhngen, Michael Stelzer, Juliane Thiele, Dietmar Schomburg: BRENDA, the enzyme information system in 2011. Nucleic Acids Research 39(Database-Issue): 670-676 (2011)

Stephanie Heinen, Bernhard Thielen, Dietmar Schomburg: KID - an algorithm for fast and efficient text mining used to automatically generate a database containing kinetic information of enzymes. BMC Bioinformatics 11: 375 (2010)

Constantin Bannert, A. Welfle, C. aus dem Spring, Dietmar Schomburg: BrEPS: a flexible and automatic protocol to compute enzyme-specific sequence profiles for functional annotation. BMC Bioinformatics 11: 589 (2010)

Volker Egelhofer, Ida Schomburg, Dietmar Schomburg: Automatic Assignment of EC Numbers. PLoS Computational Biology 6(1) (2010)

Dietmar Schomburg, Andreas Grote (Eds.): German Conference on Bioinformatics 2010, September 20-22, 2010, Technische Universität Carolo Wilhelmina zu Braunschweig, Germany. LNI 173, GI 2010, isbn 978-3-88579-267-3

Markus Leber, Volker Egelhofer, Ida Schomburg, Dietmar Schomburg: Automatic assignment of reaction operators to enzymatic reactions. Bioinformatics 25(23): 3135-3142 (2009)

Bernhard Thielen, Stephanie Heinen, Dietmar Schomburg: mSpecs: a software tool for the administration and editing of mass spectral libraries in the field of metabolomics. BMC Bioinformatics 10 (2009)

Antje Chang, Maurice Scheer, Andreas Grote, Ida Schomburg, Dietmar Schomburg: BRENDA, AMENDA and FRENDA the enzyme information system: new content and tools in 2009. Nucleic Acids Research 37(Database-Issue): 588-592 (2009)

Philipp Heuser, Dietmar Schomburg: Combination of scoring schemes for protein docking. BMC Bioinformatics 8 (2007)

Claudia Choi, Richard Münch, Boyke Bunk, Jens Barthelmes, Christian Ebeling, Dietmar Schomburg, Max Schobert, Dieter Jahn: Combination of a data warehouse concept with web services for the establishment of the Pseudomonas systems biology database SYSTOMONAS. J. Integrative Bioinformatics 4(1) (2007)

Jens Barthelmes, Christian Ebeling, Antje Chang, Ida Schomburg, Dietmar Schomburg: BRENDA, AMENDA and FRENDA: the enzyme information system in 2007. Nucleic Acids Research 35(Database-Issue): 511-514 (2007)

Claudia Choi, Richard Münch, Stefan Leupold, Johannes Klein, Inga Siegel, Bernhard Thielen, Beatrice Benkert, Martin Kucklick, Max Schobert, Jens Barthelmes, Christian Ebeling, Isam Haddad, Maurice Scheer, Andreas Grote, Karsten Hiller, Boyke Bunk, Kerstin Schreiber, Ida Retter, Dietmar Schomburg, Dieter Jahn: SYSTOMONAS - an integrated database for systems biology analysis of Pseudomonas. Nucleic Acids Research 35(Database-Issue): 533-537 (2007)

Frank Klawonn, Claudia Choi, Beatrice Benkert, Bernhard Thielen, Richard Münch, Max Schobert, Dietmar Schomburg, Dieter Jahn: A Likelihood Ratio Test for Differential Metabolic Profiles in Multiple Intensity Measurements. KES (2) 2007: 485-492

Syed Asad Rahman, Dietmar Schomburg: Observing local and global properties of metabolic pathways: "load points" and "choke points" in the metabolic networks. Bioinformatics 22(14): 1767-1774 (2006)

Philipp Heuser, Dietmar Schomburg: Optimised amino acid specific weighting factors for unbound protein docking. BMC Bioinformatics 7: 344 (2006)

Vijaya Parthiban, M. Michael Gromiha, Dietmar Schomburg: CUPSAT: prediction of protein stability upon point mutations. Nucleic Acids Research 34(Web-Server-Issue): 239-242 (2006)

Syed Asad Rahman, P. Advani, R. Schunk, Rainer Schrader, Dietmar Schomburg: Metabolic pathway analysis web service (Pathway Hunter Tool at CUBIC). Bioinformatics 21(7): 1189-1193 (2005)

Joachim Reichelt, Guido Dieterich, Marsel Kvesic, Dietmar Schomburg, Dirk W. Heinz: BRAGI: linking and visualization of database information in a 3D viewer and modeling tool. Bioinformatics 21(7): 1291-1293 (2005)

Oliver Hofmann, Dietmar Schomburg: Concept-based annotation of enzyme classes. Bioinformatics 21(9): 2059-2066 (2005)

Syed Asad Rahman, Pardha Saradhi Jonnalagadda, Jyothi Padiadpu, Kai Hartmann, Rainer Schrader, Dietmar Schomburg: Metabolic Network Analysis: Implication And Application. BMC Bioinformatics 6(S-3) (2005)

Torsten Crass, Iris Antes, Rico Basekow, Peer Bork, Christian Buning, Maik Christensen, Holger Claussen, Christian Ebeling, Peter Ernst, Valérie Gailus-Durner, Karl-Heinz Glatting, Rolf Gohla, Frank Gößling, Korbinian Grote, Karsten R. Heidtke, Alexander Herrmann, Sean O'Keeffe, O. Kießlich, Sven Kolibal, Jan O. Korbel, Thomas Lengauer, Ines Liebich, Mark van der Linden, Hannes Luz, Kathrin Meissner, Christian von Mering, Heinz-Theodor Mevissen, Hans-Werner Mewes, Holger Michael, Martin Mokrejs, Tobias Müller, Heike Pospisil, Matthias Rarey, Jens G. Reich, Ralf Schneider, Dietmar Schomburg, Steffen Schulze-Kremer, Knut Schwarzer, Ingolf Sommer, Stephan Springstubbe, Sándor Suhai, Gnanasekaran Thoppae, Martin Vingron, Jens Warfsmann, Thomas Werner, Daniel Wetzler, Edgar Wingender, Ralf Zimmer: The Helmholtz Network for Bioinformatics: an integrative web portal for bioinformatics resources. Bioinformatics 20(2): 268-270 (2004)

Ida Schomburg, Antje Chang, Christian Ebeling, Marion Gremse, Christian Heldt, Gregor Huhn, Dietmar Schomburg: BRENDA, the enzyme database: updates and major new developments. Nucleic Acids Research 32(Database-Issue): 431-433 (2004)

Astrid Fleischmann, Michael Darsow, Kirill Degtyarenko, Wolfgang Fleischmann, Sinéad Boyce, Kristian B. Axelsen, Amos Bairoch, Dietmar Schomburg, Keith F. Tipton, Rolf Apweiler: IntEnz, the integrated relational enzyme database. Nucleic Acids Research 32(Database-Issue): 434-437 (2004)

Guido Dieterich, Marsel Kvesic, Dietmar Schomburg, Dirk W. Heinz, Joachim Reichelt: Integrating public databases into an existing protein visualization and modeling program - BRAGI. German Conference on Bioinformatics 2004: 149-156

Dietmar Schomburg, Martin Vingron: Bioinformatics research and education in Germany. In Silico Biology 2: 15 (2002)

Ida Schomburg, Antje Chang, Dietmar Schomburg: BRENDA, enzyme data and metabolic information. Nucleic Acids Research 30(1): 47-49 (2002)

P. Pipenbacher, Alexander Schliep, Sebastian Schneckener, Alexander Schönhuth, Dietmar Schomburg, Rainer Schrader: ProClust: improved clustering of protein sequences with an extended graph-based approach. ECCB 2002: 182-191

Eva Bolten, Alexander Schliep, Sebastian Schneckener, Dietmar Schomburg, Rainer Schrader: Clustering protein sequences-structure prediction by transitive homology. Bioinformatics 17(10): 935-941 (2001)

Eva Bolten, Alexander Schliep, Sebastian Schneckener, Dietmar Schomburg, Rainer Schrader: Strongly Connected Components can Predict Protein Structure. Electronic Notes in Discrete Mathematics 8: 10-13 (2001)

Dietmar Schomburg, Ida Schomburg, Antje Chang, Oliver Hofmann, Christian Ebeling, F. Ehrentreich: BRENDA a resource for Enzyme data and metabolic pathway information. German Conference on Bioinformatics 2001: 222

Dietmar Schomburg: Functional Genomics - an integrated approach to the biosiences. German Conference on Bioinformatics 1999: 80

Eva Bolten, Alexander Schliep, Sebastian Schneckener, Dietmar Schomburg, Rainer Schrader: Clustering Protein Sequences ? Structure Prediction by Transitive Homology. German Conference on Bioinformatics 1999: 181

Oliver Leven, Dietmar Schomburg: Prediction of Protein Thermostability. German Conference on Bioinformatics 1999: 210

Dietmar Schomburg, Ida Schomburg, Antje Chang, C. Bänsch: BRENDA the Information System for Enzymes and metabolic Information. German Conference on Bioinformatics 1999: 226-227

Olav Zimmermann, Peter Krämer, Dietmar Schomburg: Pre- and Postfiltering in Protein Docking. German Conference on Bioinformatics 1999: 231-232

Michael Meyer, Gerd Wohlfahrt, Jörg Knäblein, Dietmar Schomburg: Aspects of the mechanism of catalysis of glucose oxidase: A docking, molecular mechanics and quantum chemical study. Journal of Computer-Aided Molecular Design 12(5): 425-440 (1998)

Peter Krämer, Dietmar Schomburg: Use of local intermolecular interactions for the prediction of protein/protein binding sites. German Conference on Bioinformatics 1998

Oliver Leven, Dietmar Schomburg: Prediction of Protein Thermostability. German Conference on Bioinformatics 1998

Dietmar Schomburg: BRENDA, Enzyme Data for Metabolic pathways. German Conference on Bioinformatics 1998

Olav Zimmermann, Oliver Martin, Dietmar Schomburg: Geometric Docking of Transmembrane Structures. German Conference on Bioinformatics 1998

Sebastian Schneckener, Dietmar Schomburg: Improvement of sequence-structure alignment quality by an empirical energy function. German Conference on Bioinformatics 1997: 179

Ralf Hofestädt, Thomas Lengauer, Markus Löffler, Dietmar Schomburg (Eds.): Bioinformatics, German Conference on Bioinformatics, Leipzig, Germany, September 30 - October 2, 1996, Selected Papers. Lecture Notes in Computer Science 1278, Springer 1997, isbn 3-540-63370-7

Uta F. Lessel, Dietmar Schomburg: Knowledge-Based Loop Prediction. German Conference on Bioinformatics 1996: 260

Michael Meyer, Gerd Wohlfahrt, Dietmar Schomburg: Aspects of the Mechanism of Glucose Oxidase. German Conference on Bioinformatics 1996: 276-277

Michael Meyer, Peter Wilson, Dietmar Schomburg: Protein Docking with Correlation Methods. German Conference on Bioinformatics 1996: 278-279

Sebastian Schneckener, Dietmar Schomburg: Optimal Gap Penalties and Similarity Matrices for Sequence Alignment. German Conference on Bioinformatics 1996: 292-293

Friedrich Ackermann, Grit Herrmann, Franz Kummert, Stefan Posch, Gerhard Sagerer, Dietmar Schomburg: Protein Docking: Combining Symbolic Descriptions of Molecular Surfaces and Grid-Based Scoring Functions. ISMB 1995: 3-11

Dietmar Schomburg: Computer Aided Protein Design: Methods and Applications. Informatik in den Biowissenschaften 1993: 11-20