Johannes Schuchhardt

Chris Bauer, Frank Kleinjung, Dorothea Rutishauser, Christian Panse, Alexandra Chadt, Tanja Dreja, Hadi Al-Hasani, Knut Reinert, Ralph Schlapbach, Johannes Schuchhardt: PPINGUIN: Peptide Profiling Guided Identification of Proteins improves quantitation of iTRAQ ratios. BMC Bioinformatics 13: 34 (2012)

Chris Bauer, Frank Kleinjung, Celia J. Smith, Mark W. Towers, Ali Tiss, Alexandra Chadt, Tanja Dreja, Dieter Beule, Hadi Al-Hasani, Knut Reinert, Johannes Schuchhardt, Rainer Cramer: Biomarker Discovery and Redundancy Reduction towards Classification using a Multi-factorial MALDI-TOF MS T2DM Mouse Model Dataset. BMC Bioinformatics 12: 140 (2011)

Johannes Schuchhardt: Systems biology approaches for prioritizing therapeutic gene targets. Ontologies and Text Mining for Life Sciences 2008

Ralf Mrowka, Johannes Schuchhardt, Christoph Gille: Oligodb-interactive design of oligo DNA for transcription profiling of human genes. Bioinformatics 18(12): 1686-1687 (2002)

Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel: Combining frequency and positional information to predict transcription factor binding sites. Bioinformatics 17(11): 1019-1026 (2001)

B. Jagla, Johannes Schuchhardt: Adaptive encoding neural networks for the recognition of human signal peptide cleavage sites. Bioinformatics 16(3): 245-250 (2000)

Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel: Finding Transcription Factor Binding Sites in Coregulated Genes by Exhaustive Sequence Search. German Conference on Bioinformatics 2000: 55-62

Dieter Beule, Johannes Schuchhardt, Arif Malik, Holger Eickhoff, Hans Lehrach, Hanspeter Herzel: Reliability of Microarray Data and Clustering. German Conference on Bioinformatics 2000: 167-174

Johannes Schuchhardt, Liying Dong, Ulrich Hoffmüller, Achim Kramer, Jens Schneider-Mergener, Hanspeter Herzel: Peptide Binding Landscapes. German Conference on Bioinformatics 2000: 183-188

Dirk Holste, Dieter Beule, Wolfram Liebermeister, Johannes Schuchhardt, Hanspeter Herzel: Mutual Information Analysis of Surrogate Gene Expression Data. German Conference on Bioinformatics 1999: 201-204

Johannes Schuchhardt, H. Rystedt, Gisbert Schneider, Uwe Hobohm, Paul Wrede: Automatic classification of Loop-Structures in Proteins by an Unsupervised Neural Network. German Conference on Bioinformatics 1997: 183-184

Gisbert Schneider, Johannes Schuchhardt, Paul Wrede: Evolutionary optimization in multimodal search space. Biological Cybernetics 74(3): 203-207 (1996)

Gisbert Schneider, Johannes Schuchhardt, Paul Wrede: Development of simple fitness landscapes for peptides by artificial neural filter systems. Biological Cybernetics 73(3): 245-254 (1995)

Gisbert Schneider, Johannes Schuchhardt, Paul Wrede: Artificial neural networks and simulated molecular evolution are potential tools for sequence-oriented protein design. Computer Applications in the Biosciences 10(6): 635-645 (1994)

Helge Rosé, Werner Ebeling, Johannes Schuchhardt: Evolutionary Strategies for Solving Frustrated Problems. International Conference on Evolutionary Computation 1994: 79-81