Anne Siegel

Santiago Videla, Carito Guziolowski, Federica Eduati, Sven Thiele, Niels Grabe, Julio Saez-Rodriguez, Anne Siegel: Revisiting the Training of Logic Models of Protein Signaling Networks with ASP. CMSB 2012: 342-361

Santiago Videla, Carito Guziolowski, Federica Eduati, Sven Thiele, Niels Grabe, Julio Saez-Rodriguez, Anne Siegel: Revisiting the Training of Logic Models of Protein Signaling Networks with a Formal Approach based on Answer Set Programming. CoRR abs/1210.0690 (2012)

Jérémie Bourdon, Damien Eveillard, Anne Siegel: Integrating Quantitative Knowledge into a Qualitative Gene Regulatory Network. PLoS Computational Biology 7(9) (2011)

Carito Guziolowski, Sylvain Blachon, Tatiana Baumuratova, Gautier Stoll, Ovidiu Radulescu, Anne Siegel: Designing Logical Rules to Model the Response of Biomolecular Networks with Complex Interactions: An Application to Cancer Modeling. IEEE/ACM Trans. Comput. Biology Bioinform. 8(5): 1223-1234 (2011)

Ovidiu Radulescu, Anne Siegel, Elisabeth Pécou, Clément Chatelain, Sandrine Lagarrigue: Genetically Regulated Metabolic Networks: Gale-Nikaido Modules and Differential Inequalities. T. Comp. Sys. Biology 13: 110-130 (2011)

Valérie Berthé, Timo Jolivet, Anne Siegel: Connectedness of fractals associated with Arnoux-Rauzy substitutions. CoRR abs/1101.1784 (2011)

Valérie Berthé, Timo Jolivet, Anne Siegel: Substitutive Arnoux-Rauzy sequences have pure discrete spectrum. CoRR abs/1108.5574 (2011)

Torsten Schaub, Anne Siegel: Testing, Diagnosing, Repairing, and Predicting from Regulatory Networks and Datasets. ERCIM News 2010(82): 30 (2010)

Martin Gebser, Carito Guziolowski, Mihail Ivanchev, Torsten Schaub, Anne Siegel, Sven Thiele, Philippe Veber: Repair and Prediction (under Inconsistency) in Large Biological Networks with Answer Set Programming. KR 2010

Sylvain Blachon, Gautier Stoll, Carito Guziolowski, Andrei Zinovyev, Emmanuel Barillot, Anne Siegel, Ovidiu Radulescu: Method for Relating Inter-patient Gene Copy Numbers Variations with Gene Expression via Gene Influence Networks. AIAI Workshops 2009: 72-87

Philippe Veber, Carito Guziolowski, Michel Le Borgne, Ovidiu Radulescu, Anne Siegel: Inferring the role of transcription factors in regulatory networks. BMC Bioinformatics 9 (2008)

Didier Caucal, Anne Siegel: Preface. ITA 42(3): 415 (2008)

Carito Guziolowski, Jeremy Gruel, Ovidiu Radulescu, Anne Siegel: Curating a Large-Scale Regulatory Network by Evaluating Its Consistency with Expression Datasets. CIBB 2008: 144-155

Pierre Arnoux, Valérie Berthé, Anne Siegel: Two-dimensional iterated morphisms and discrete planes. Theor. Comput. Sci. 319(1-3): 145-176 (2004)