Ninghui Sun

Huiwei Lv, Guangming Tan, Mingyu Chen, Ninghui Sun: Understanding parallelism in graph traversal on multi-core clusters. Computer Science - R&D 28(2-3): 193-201 (2013)

Jie Yan, Guangming Tan, Xiuxia Zhang, Erlin Yao, Ninghui Sun: Vlock: Lock virtualization mechanism for exploiting fine-grained parallelism in graph traversal algorithms. CGO 2013: 1-10

Chunjie Luo, Jianfeng Zhan, Zhen Jia, Lei Wang, Gang Lu, Lixin Zhang, Cheng-Zhong Xu, Ninghui Sun: CloudRank-D: benchmarking and ranking cloud computing systems for data processing applications. Frontiers of Computer Science 6(4): 347-362 (2012)

Dongrui Fan, Hao Zhang, Da Wang, Xiaochun Ye, Fenglong Song, Guojie Li, Ninghui Sun: Godson-T: An Efficient Many-Core Processor Exploring Thread-Level Parallelism. IEEE Micro 32(2): 38-47 (2012)

Shuai Jiao, Paolo Ienne, Xiaochun Ye, Da Wang, Dongrui Fan, Ninghui Sun: CRAW/P: A Workload Partition Method for the Efficient Parallel Simulation of Manycores. Euro-Par 2012: 102-114

Wen Tang, Wendi Wang, Bo Duan, Chunming Zhang, Guangming Tan, Peiheng Zhang, Ninghui Sun: Accelerating Millions of Short Reads Mapping on a Heterogeneous Architecture with FPGA Accelerator. FCCM 2012: 184-187

Wendi Wang, Bo Duan, Wen Tang, Chunming Zhang, Guangming Tan, Peiheng Zhang, Ninghui Sun: A coarse-grained stream architecture for cryo-electron microscopy images 3D reconstruction. FPGA 2012: 143-152

Shuai Jiao, Da Wang, Xiaochun Ye, Weizhi Xu, Hao Zhang, Ninghui Sun: PartitionSim: A Parallel Simulator for Many-cores. HPCC-ICESS 2012: 119-126

Shuai Jiao, Da Wang, Xiaochun Ye, Weizhi Xu, Hao Zhang, Ninghui Sun: ALWP: A Workload Partition Method for the Efficient Parallel Simulation of Manycores. HPCC-ICESS 2012: 135-142

Jiajia Li, Xingjian Li, Guangming Tan, Mingyu Chen, Ninghui Sun: An optimized large-scale hybrid DGEMM design for CPUs and ATI GPUs. ICS 2012: 377-386

Tao Jiang, Rui Hou, Lixin Zhang, Ke Zhang, Licheng Chen, Mingyu Chen, Ninghui Sun: Micro-architectural characterization of desktop cloud workloads. IISWC 2012: 131-140

Erlin Yao, Rui Wang, Mingyu Chen, Guangming Tan, Ninghui Sun: A Case Study of Designing Efficient Algorithm-based Fault Tolerant Application for Exascale Parallelism. IPDPS 2012: 438-448

Wendi Wang, Wen Tang, Linchuan Li, Guangming Tan, Peiheng Zhang, Ninghui Sun: Investigating Memory Optimization of Hash-index for Next Generation Sequencing on Multi-core Architecture. IPDPS Workshops 2012: 665-674

Jianfeng Zhan, Lixin Zhang, Ninghui Sun, Lei Wang, Zhen Jia, Chunjie Luo: High Volume Throughput Computing: Identifying and Characterizing Throughput Oriented Workloads in Data Centers. IPDPS Workshops 2012: 1712-1721

Jianfeng Zhan, Lixin Zhang, Ninghui Sun, Lei Wang, Zhen Jia, Chunjie Luo: High Volume Throughput Computing: Identifying and Characterizing Throughput Oriented Workloads in Data Centers. CoRR abs/1202.6134 (2012)

Huiwei Lv, Guangming Tan, Mingyu Chen, Ninghui Sun: Compression and Sieve: Reducing Communication in Parallel Breadth First Search on Distributed Memory Systems. CoRR abs/1208.5542 (2012)

Ninghui Sun, Jing Xing, Zhigang Huo, Guangming Tan, Jin Xiong, Bo Li, Can Ma: Dawning Nebulae: A PetaFLOPS Supercomputer with a Heterogeneous Structure. J. Comput. Sci. Technol. 26(3): 352-362 (2011)

Xingkui Liu, Xinchun Liu, Ninghui Sun: Fast and Compact Regular Expression Matching Using Character Substitution. ANCS 2011: 85-86

Zheng Cao, Hongwei Tang, Qiang Li, Bo Li, Fei Chen, Kai Wang, Xuejun An, Ninghui Sun: Design of HPC Node with Heterogeneous Processors. CLUSTER 2011: 130-138

Bo Duan, Wendi Wang, Xingjian Li, Chunming Zhang, Peiheng Zhang, Ninghui Sun: Floating-point mixed-radix FFT core generation for FPGA and comparison with GPU and CPU. FPT 2011: 1-6

Huafeng Xi, Jianfeng Zhan, Zhen Jia, Xuehai Hong, Lei Wang, Lixin Zhang, Ninghui Sun, Gang Lu: Characterization of real workloads of web search engines. IISWC 2011: 15-25

Dawei Wang, Xian-He Sun, Nongda Hu, Ninghui Sun: EthSpeeder: A High-performance Scalable Fault-Tolerant Ethernet Network Architecture for Data Center. NAS 2011: 355-363

Qiang Li, Zhigang Huo, Ninghui Sun: Optimizing MPI Alltoall Communication of Large Messages in Multicore Clusters. PDCAT 2011: 257-262

Guangming Tan, Linchuan Li, Sean Triechle, Everett Phillips, Yungang Bao, Ninghui Sun: Fast implementation of DGEMM on Fermi GPU. SC 2011: 35

Fei Chen, Zheng Cao, Kai Wang, Xuejun An, Ninghui Sun: HPP controller: a system controller for high performance computing. Frontiers of Computer Science in China 4(4): 456-465 (2010)

Qiang Li, Bo Li, Zhigang Huo, Ninghui Sun: Design and implementation of communication system of the Dawning 6000 supercomputer. Frontiers of Computer Science in China 4(4): 466-474 (2010)

Ninghui Sun, David K. Kahaner, Debbie Chen: High-performance Computing in China: Research and Applications. IJHPCA 24(4): 363-409 (2010)

Liu Peng, Guangming Tan, Rajiv K. Kalia, Aiichiro Nakano, Priya Vashishta, Dongrui Fan, Ninghui Sun: Preliminary Investigation of Accelerating Molecular Dynamics Simulation on Godson-T Many-Core Processor. Euro-Par Workshops 2010: 349-356

Qiang Li, Zhigang Huo, Ninghui Sun: Building a Personal High Performance Computer with Heterogeneous Processors. GCC 2010: 223-228

Kai Wang, Fei Chen, Zheng Cao, Xuejun An, Ninghui Sun: Adding an Expressway to Accelerate the Neighborhood Communication. HPCC 2010: 43-48

Qingbo Yuan, Jianbo Zhao, Mingyu Chen, Ninghui Sun: GenerOS: An asymmetric operating system kernel for multi-core systems. IPDPS 2010: 1-10

Huiwei Lv, Yuan Cheng, Lu Bai, Mingyu Chen, Dongrui Fan, Ninghui Sun: P-GAS: Parallelizing a Cycle-Accurate Event-Driven Many-Core Processor Simulator Using Parallel Discrete Event Simulation. PADS 2010: 89-96

Mingyuan An, Yang Wang, Weiping Wang, Ninghui Sun: Integrating DBMSs as a Read-Only Execution Layer into Hadoop. PDCAT 2010: 17-26

Kai Wang, Fei Chen, Zheng Cao, Xuejun An, Ninghui Sun: HPP Controller: A System Controller Dedicated for Message Passing. PDCAT 2010: 261-266

Wendi Wang, Bo Duan, Chunming Zhang, Peiheng Zhang, Ninghui Sun: Accelerating 2D FFT with Non-Power-of-Two Problem Size on FPGA. ReConFig 2010: 208-213

Jianwei Xu, Mingyu Chen, Gui Zheng, Zheng Cao, Huiwei Lv, Ninghui Sun: SimK: A Large-Scale Parallel Simulation Engine. J. Comput. Sci. Technol. 24(6): 1048-1060 (2009)

Guangming Tan, Ninghui Sun, Guang R. Gao: Improving Performance of Dynamic Programming via Parallelism and Locality on Multicore Architectures. IEEE Trans. Parallel Distrib. Syst. 20(2): 261-274 (2009)

Qiang Li, Panyong Zhang, Ninghui Sun: HPP-Controller: An intra-node controller designed for connecting heterogeneous CPUs. CLUSTER 2009: 1-4

Guangming Tan, Dengbiao Tu, Ninghui Sun: A Parallel Algorithm for Computing Betweenness Centrality. ICPP 2009: 340-347

Hua Cheng, Zuoning Chen, Ninghui Sun, Fenbin Qi, Chaoqun Dong, Laiwang Cheng: A Virtualized Self-Adaptive Parallel Programming Framework for Heterogeneous High Productivity Computers. ISPA 2009: 543-548

Huaiming Song, Mingyuan An, Yang Wang, Weiping Wang, Ninghui Sun: Group-by Query Process in Middleware of Large Scale Data Intensive Systems. NAS 2009: 82-89

Qingbo Yuan, Yungang Bao, Mingyu Chen, Ninghui Sun: A Scalability Analysis of the Symmetric Multiprocessing Architecture in Multi-Core System. NAS 2009: 231-234

Kai Wang, Xiaomin Li, Xuejun An, Ninghui Sun: Gemini NI: An Integration of Two Network Interfaces. NAS 2009: 439-446

Jing Xing, Jin Xiong, Ninghui Sun, Jie Ma: Adaptive and scalable metadata management to support a trillion files. SC 2009

Zheng Cao, Jianwei Xu, Mingyu Chen, Gui Zheng, Huiwei Lv, Ninghui Sun: HPPNetSim: a parallel simulation of large-scale interconnection networks. SpringSim 2009

Xiaojun Yang, Fei Chen, Hailiang Cheng, Ninghui Sun: A HyperTransport-based personal parallel computer. CLUSTER 2008: 126-132

Huan Chen, Jin Xiong, Ninghui Sun: A novel hint-based I/O mechanism for centralized file server of cluster. CLUSTER 2008: 194-201

Dawei Wang, Zheng Cao, Xinchun Liu, Ninghui Sun: HPP Switch: A Novel High Performance Switch for HPC. Hot Interconnects 2008: 145-153

Ninghui Sun, Dan Meng: Dawning4000A high performance computer. Frontiers of Computer Science in China 1(1): 20-25 (2007)

Guangming Tan, Shengzhong Feng, Ninghui Sun: Cache oblivious algorithms for nonserial polyadic programming. The Journal of Supercomputing 39(2): 227-249 (2007)

Jianfeng Zhan, Lei Wang, Bibo Tu, Zhihong Zhang, Yu Wen, Yuansheng Chen, Wei Zhou, Dan Meng, Ninghui Sun: A layered design methodology of cluster system stack. CLUSTER 2007: 404-409

Huan Chen, Yi Zhao, Jin Xiong, Jie Ma, Ninghui Sun: United-FS: A Logical File System Providing a Single Image of Multiple Physical File Systems on NFS Server. IPDPS 2007: 1-7

Xiaojun Yang, Dongdong Wu, Ninghui Sun: Design of NIC Based on I/O Processor for Cluster Interconnect Network. IEEE NAS 2007: 3-8

Ninghui Sun: HPP: an architecture for high performance and utility computing. China HPC 2007: 25-31

Jianfeng Zhan, Lei Wang, Bibo Tu, Hui Wang, Zhihong Zhang, Yi Jin, Yu Wen, Yuansheng Chen, Peng Wang, Bizhu Qiu, Dan Meng, Ninghui Sun: The design methodology of Phoenix cluster system software stack. China HPC 2007: 174-182

Guangming Tan, Ninghui Sun, Guang R. Gao: A parallel dynamic programming algorithm on a multi-core architecture. SPAA 2007: 135-144

Guangming Tan, Lin Xu, Dongbo Bu, Shengzhong Feng, Ninghui Sun: Improvement of Performance of MegaBlast Algorithm for DNA Sequence Alignment. J. Comput. Sci. Technol. 21(6): 973-978 (2006)

Jianfeng Zhan, Gengpu Liu, Lei Wang, Bibo Tu, Yi Jin, Yang Li, Yan Hao, Xuehai Hong, Dan Meng, Ninghui Sun: PhoenixG: A Unified Management Framework for Industrial Information Grid. CCGRID 2006: 489-496

Guangming Tan, Liu Peng, Shengzhong Feng, Ninghui Sun: Load Balancing and Parallel Multiple Sequence Alignment with Tree Accumulation. Euro-Par 2006: 1138-1147

Huan Chen, Rongfeng Tang, Yi Zhao, Jin Xiong, Jie Ma, Ninghui Sun: Research on Key Technologies of Load Balancing for NFS Server with Multiple Network Paths. GCC Workshops 2006: 407-411

Guangming Tan, Ninghui Sun, Dongbo Bu: Improving locality of nonserial polyadic dynamic programming. IPDPS 2006

Guangming Tan, Lin Xu, Shengzhong Feng, Ninghui Sun: An experimental study of optimizing bioinformatics applications. IPDPS 2006

Guangming Tan, Shengzhong Feng, Ninghui Sun: Biology - Locality and parallelism optimization for dynamic programming algorithm in bioinformatics. SC 2006: 78

Xiaojuan Sun, Xinliang Zhou, Ninghui Sun, Mingyu Chen: Parallel Optimization Technology for Backbone Network Intrusion Detection System. CIS (2) 2005: 322-327

Jin Xiong, Rongfeng Tang, Sining Wu, Dan Meng, Ninghui Sun: An Efficient Metadata Distribution Policy for Cluster File Systems. CLUSTER 2005: 1-10

Jianfeng Zhan, Ninghui Sun: Fire Phoenix Cluster Operating System Kernel and its Evaluation. CLUSTER 2005: 1-9

Guangming Tan, Xinchun Liu, Ninghui Sun: An Efficient Dynamic Programming Algorithm and Implementation for RNA Secondary Structure Prediction. International Conference on Computational Science (2) 2005: 869-876

Guangming Tan, Shengzhong Feng, Ninghui Sun: Exploiting Parallelization for RNA Secondary Structure Prediction in Cluster. International Conference on Computational Science (3) 2005: 979-982

Guangming Tan, Lin Xu, Yishan Jiao, Shengzhong Feng, Dongbo Bu, Ninghui Sun: An Optimized Algorithm of High Spatial-temporal Efficiency for MegaBlast. ICPADS (2) 2005: 704-708

Taoying Liu, Zhiwei Xu, Ninghui Sun, Dan Meng: Destructive Transaction: Human-Oriented Cluster System Management Mechanism. IPDPS 2005

Xiaocheng Zhou, Zhigang Huo, Ninghui Sun, Yingchao Zhou: Impact of Page Size on Communication Performance. IPDPS 2005

Guangming Tan, Shengzhong Feng, Ninghui Sun: Load Balancing Algorithm in Cluster-based RNA secondary structure Prediction. ISPDC 2005: 91-96

Xiaojun Yang, Lili Guo, Peiheng Zhang, Ninghui Sun: Design of System Area Network Interface Card Based on Intel IOP310. ICESS 2004: 165-171

Jin Xiong, Sining Wu, Dan Meng, Ninghui Sun, Guojie Li: Design and Performance of the Dawning Cluster File System. CLUSTER 2003: 232-

Xinyu Liu, Wen Gao, Ninghui Sun: NCPN: A Simulation Tool for Coloured Petri Nets. IASTED PDCS 2002: 266-271

Zhiwei Xu, Ninghui Sun, Dan Meng, Wei Li: Cluster and Grid Superservers: The Dawning Experiences in China. CLUSTER 2001: 351-358

Ninghui Sun: Reference implementation of scalable I/O low-level API on Intel Paragon. J. Comput. Sci. Technol. 14(3): 206-223 (1999)

Ninghui Sun, Wenzhuo Liu, Hong Liu, Chuanbao Wang, Xuelin Lu, Hao Zhang: Dawning-1000 PROOS distributed operating system. J. Comput. Sci. Technol. 12(2): 160-166 (1997)