Yoshinori Tamada

Yoshinori Tamada, Rui Yamaguchi, Seiya Imoto, Osamu Hirose, Ryo Yoshida, Masao Nagasaki, Satoru Miyano: SiGN-SSM: open source parallel software for estimating gene networks with state space models. Bioinformatics 27(8): 1172-1173 (2011)

Yoshinori Tamada, Seiya Imoto, Satoru Miyano: Parallel Algorithm for Learning Optimal Bayesian Network Structure. Journal of Machine Learning Research 12: 2437-2459 (2011)

Yoshinori Tamada, Seiya Imoto, Hiromitsu Araki, Masao Nagasaki, Cristin G. Print, Stephen D. Charnock-Jones, Satoru Miyano: Estimating Genome-Wide Gene Networks Using Nonparametric Bayesian Network Models on Massively Parallel Computers. IEEE/ACM Trans. Comput. Biology Bioinform. 8(3): 683-697 (2011)

Seiya Imoto, Yoshinori Tamada, Hiromitsu Araki, Satoru Miyano: Computational Drug Target Pathway Discovery: A Bayesian Network Approach. Handbook of Statistical Bioinformatics 2011: 501-532

Seiya Imoto, Kaname Kojima, Eric Perrier, Yoshinori Tamada, Satoru Miyano: Searching Optimal Bayesian Network Structure on Constraint Search Space: Super-Structure Approach. JSAI-isAI Workshops 2010: 210-218

Satoru Miyano, Rui Yamaguchi, Yoshinori Tamada, Masao Nagasaki, Seiya Imoto: Gene Networks Viewed through Two Models. BICoB 2009: 54-66

Yoshinori Tamada, Hiromitsu Araki, Seiya Imoto, Masao Nagasaki, Atsushi Doi, Yukiko Nakanishi, Yuki Tomiyasu, Kaori Yasuda, Ben Dunmore, Deborah Sanders, Sally Humphreys, Cristin G. Print, Stephen D. Charnock-Jones, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano: Unraveling Dynamic Activities of Autocrine Pathways that Control Drug-Response Transcriptome Networks. Pacific Symposium on Biocomputing 2009: 251-263

Alexandre Termier, Yoshinori Tamada, Kazuyuki Numata, Seiya Imoto, Takashi Washio, Tomoyuki Higuchi: DIGDAG, a First Algorithm to Mine Closed Frequent Embedded Sub-DAGs. MLG 2007

Seiya Imoto, Yoshinori Tamada, Hiromitsu Araki, Kaori Yasuda, Cristin G. Print, Stephen D. Charnock-Jones, Deborah Sanders, Christopher J. Savoie, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano: Computational Strategy for Discovering Druggable Gene Networks from Genome-Wide RNA Expression Profiles. Pacific Symposium on Biocomputing 2006: 559-571

Yoshinori Tamada, Hideo Bannai, Seiya Imoto, Toshiaki Katayama, Minoru Kanehisa, Satoru Miyano: Utilizing Evolutionary Information and Gene Expression Data for Estimating Gene Networks with Bayesian Network Models. J. Bioinformatics and Computational Biology 3(6): 1295-1314 (2005)

Naoki Nariai, Yoshinori Tamada, Seiya Imoto, Satoru Miyano: Estimating gene regulatory networks and protein-protein interactions of Saccharomyces cerevisiae from multiple genome-wide data. ECCB/JBI 2005: 212

Osamu Hirose, Naoki Nariai, Yoshinori Tamada, Hideo Bannai, Seiya Imoto, Satoru Miyano: Estimating Gene Networks from Expression Data and Binding Location Data via Boolean Networks. ICCSA (3) 2005: 349-356

Yoshinori Tamada, SunYong Kim, Hideo Bannai, Seiya Imoto, Kousuke Tashiro, Satoru Kuhara, Satoru Miyano: Estimating gene networks from gene expression data by combining Bayesian network model with promoter element detection. ECCB 2003: 227-236

Sascha Ott, Yoshinori Tamada, Hideo Bannai, Kenta Nakai, Satoru Miyano: Intrasplicing - Analysis of Long Intron Sequences. Pacific Symposium on Biocomputing 2003: 339-350

Hideo Bannai, Yoshinori Tamada, Osamu Maruyama, Kenta Nakai, Satoru Miyano: Extensive feature detection of N-terminal protein sorting signals. Bioinformatics 18(2): 298-305 (2002)

Osamu Maruyama, Hideo Bannai, Yoshinori Tamada, Satoru Kuhara, Satoru Miyano: Fast algorithm for extracting multiple unordered short motifs using bit operations. Inf. Sci. 146(1-4): 115-126 (2002)

Yoshinori Tamada, Hideo Bannai, Osamu Maruyama, Satoru Miyano: Foundations of Designing Computational Knowledge Discovery Processes. Progress in Discovery Science 2002: 459-470

Osamu Maruyama, Satoru Kuhara, Hideo Bannai, Satoru Miyano, Yoshinori Tamada: Fast Algorithm for Extracting Multiple Unordered Short Motifs Using Bit Operations. JCIS 2002: 1180-1185

Hideo Bannai, Yoshinori Tamada, Osamu Maruyama, Satoru Miyano: HypothesisCreator: Concepts for Accelerating the Computational Knowledge Discovery Process. Electron. Trans. Artif. Intell. 5(B): 73-83 (2001)

Hideo Bannai, Yoshinori Tamada, Osamu Maruyama, Satoru Miyano: VML: A View Modeling Language for Computational Knowledge Discovery. Discovery Science 2001: 30-44

Hideo Bannai, Yoshinori Tamada, Osamu Maruyama, Kenta Nakai, Satoru Miyano: Views: Fundamental Building Blocks in the Process of Knowledge Discovery. FLAIRS Conference 2001: 233-238