William R. Taylor

Michael I. Sadowski, William R. Taylor: Evolutionary inaccuracy of pairwise structural alignments. Bioinformatics 28(9): 1209-1215 (2012)

Zoe Katsimitsoulia, William R. Taylor: Coarse-Grained Simulation of Myosin-V Movement. Comp. Math. Methods in Medicine 2012 (2012)

Siv Midtun Hollup, Michael I. Sadowski, Inge Jonassen, William R. Taylor: Exploring the limits of fold discrimination by structural alignment: A large scale benchmark using decoys of known fold. Computational Biology and Chemistry 35(3): 174-188 (2011)

Michael I. Sadowski, Katarzyna Maksimiak, William R. Taylor: Direct correlation analysis improves fold recognition. Computational Biology and Chemistry 35(5): 323-332 (2011)

William R. Taylor, Zoe Katsimitsoulia, Alexei Poliakov: Simulation of Cell Movement and Interaction. J. Bioinformatics and Computational Biology 9(1): 91-110 (2011)

William R. Taylor, Zoe Katsimitsoulia: A soft collision detection algorithm for simple Brownian dynamics. Computational Biology and Chemistry 34(1): 1-10 (2010)

Zoe Katsimitsoulia, William R. Taylor: A hierarchic collision detection algorithm for simple Brownian dynamics. Computational Biology and Chemistry 34(2): 71-79 (2010)

Ben Grainger, Michael I. Sadowski, William R. Taylor: Re-Evaluating the "Rules" of Protein Topology. Journal of Computational Biology 17(10): 1371-1384 (2010)

Vijayalakshmi Chelliah, William R. Taylor: Functional site prediction selects correct protein models. BMC Bioinformatics 9(S-1) (2008)

William R. Taylor: Protein knots and fold complexity: Some new twists. Computational Biology and Chemistry 31(3): 151-162 (2007)

Inge Jonassen, Daniel Klose, William R. Taylor: Protein model refinement using structural fragment tessellation. Computational Biology and Chemistry 30(5): 360-366 (2006)

Jakob Vesterstrøm, William R. Taylor: Flexible Secondary Structure Based Protein Structure Comparison Applied to the Detection of Circular Permutation. Journal of Computational Biology 13(1): 43-63 (2006)

Kuang Lin, Victor A. Simossis, William R. Taylor, Jaap Heringa: A simple and fast secondary structure prediction method using hidden neural networks. Bioinformatics 21(2): 152-159 (2005)

William R. Taylor: Modelling molecular stability in the RNA world. Computational Biology and Chemistry 29(4): 259-272 (2005)

Ingvar Eidhammer, Inge Jonassen, William R. Taylor: Protein bioinformatics - an algorithmic approach to sequence and structure analysis. Wiley 2004, isbn 978-0-470-84839-5, pp. I-XVIII, 1-355

William R. Taylor: A molecular model for transcription in the RNA world based on the ribosome large subunit. Computational Biology and Chemistry 28(5-6): 313-319 (2004)

William R. Taylor, Bing Xiao, Steven J. Gamblin, Kuang Lin: A knot or not a knot? SETting the record 'straight' on proteins. Computational Biology and Chemistry 27(1): 11-15 (2003)

Kuang Lin, Jens Kleinjung, William R. Taylor, Jaap Heringa: Testing homology with Contact Accepted mutatiOn (CAO): a contact-based Markov model of protein evolution. Computational Biology and Chemistry 27(2): 93-102 (2003)

William R. Taylor, Robin E. J. Munro, Kjell Petersen, Robert P. Bywater: Ab initio modelling of the N-terminal domain of the secretin receptors. Computational Biology and Chemistry 27(2): 103-114 (2003)

Darrell Conklin, Inge Jonassen, Rein Aasland, William R. Taylor: Association of nucleotide patterns with gene function classes: application to human 3' untranslated sequences. Bioinformatics 18(1): 182-189 (2002)

Inge Jonassen, Ingvar Eidhammer, Darrell Conklin, William R. Taylor: Structure motif discovery and mining the PDB. Bioinformatics 18(2): 362-367 (2002)

Kuang Lin, Alex C. W. May, William R. Taylor: Threading Using Neural nEtwork (TUNE): the measure of protein sequence-structure compatibility. Bioinformatics 18(10): 1350-1357 (2002)

Kuang Lin, Alex C. W. May, William R. Taylor: Amino Acid Substitution Matrices from an Artificial Neural Network Model. Journal of Computational Biology 8(5): 471-481 (2001)

William R. Taylor, Gisle Sælensminde, Ingvar Eidhammer: Multiple Protein Sequence Alignment using Double-dynamic Programming. Computers & Chemistry 24(1): 3-12 (2000)

Ingvar Eidhammer, Inge Jonassen, William R. Taylor: Structure Comparison and Structure Patterns. Journal of Computational Biology 7(5): 685-716 (2000)

Inge Jonassen, Ingvar Eidhammer, Darrell Conklin, William R. Taylor: Structure Motif Discovery and Mining the PDB. German Conference on Bioinformatics 2000: 175-182

William R. Taylor, Nigel P. Brown: Iterated Sequence Databank Search Methods. Computers & Chemistry 23(3-4): 365-385 (1999)

András Aszódi, William R. Taylor: Hierarchic Inertial Projection: A Fast Distance Matrix Embedding Algorithm. Computers & Chemistry 21(1): 13-23 (1997)

Nigel P. Brown, Christine A. Orengo, William R. Taylor: A Protein Structure Comparison Methodology. Computers & Chemistry 20(3): 359-380 (1996)

Kerr Hatrick, William R. Taylor: Sequence Conservation and Correlation Measures in Protein Structure Prediction. Computers & Chemistry 18(3): 245-249 (1994)

William R. Taylor: Motif-Biased Protein Sequence Alignment. Journal of Computational Biology 1(4): 297-310 (1994)

András Aszódi, William R. Taylor: Connection topology of proteins. Computer Applications in the Biosciences 9(5): 523-529 (1993)

William R. Taylor: Protein Structure Prediction From Sequence. Computers & Chemistry 17(2): 117-122 (1993)

David T. Jones, William R. Taylor, Janet M. Thornton: The rapid generation of mutation data matrices from protein sequences. Computer Applications in the Biosciences 8(3): 275-282 (1992)

William R. Taylor: Multiple sequence alignment by a pairwise algorithm. Computer Applications in the Biosciences 3(2): 81-87 (1987)