Bruce Tidor

Bracken M. King, Bruce Tidor: MIST: Maximum Information Spanning Trees for dimension reduction of biological data sets. Bioinformatics 25(9): 1165-1172 (2009)

Michael D. Altman, Jaydeep P. Bardhan, Jacob K. White, Bruce Tidor: Accurate solution of multi-region continuum biomolecule electrostatic problems using the linearized Poisson-Boltzmann equation with curved boundary elements. Journal of Computational Chemistry 30(1): 132-153 (2009)

Bernard R. Brooks, Charles L. Brooks III, Alexander D. MacKerell Jr., Lennart Nilsson, Robert J. Petrella, Benoît Roux, Y. Won, G. Archontis, Christian Bartels, S. Boresch, Amedeo Caflisch, Leo S. D. Caves, Qiang Cui, Aaron R. Dinner, Michael Feig, S. Fischer, Jiali Gao, Milan Hodoscek, Wonpil Im, Krzysztof Kuczera, Themis Lazaridis, J. Ma, V. Ovchinnikov, Emanuele Paci, Richard W. Pastor, C. B. Post, J. Z. Pu, Michael Schaefer, Bruce Tidor, Richard M. Venable, H. Lee Woodcock III, X. Wu, W. Yang, Darrin M. York, Martin Karplus: CHARMM: The biomolecular simulation program. Journal of Computational Chemistry 30(10): 1545-1614 (2009)

Eun-Jong Hong, Shaun M. Lippow, Bruce Tidor, Tomás Lozano-Pérez: Rotamer optimization for protein design through MAP estimation and problem-size reduction. Journal of Computational Chemistry 30(12): 1923-1945 (2009)

A. Katharina Wilkins, Bruce Tidor, Jacob White, Paul I. Barton: Sensitivity Analysis for Oscillating Dynamical Systems. SIAM J. Scientific Computing 31(4): 2706-2732 (2009)

Shih-Hsien Kuo, Bruce Tidor, Jacob White: A meshless, spectrally accurate, integral equation solver for molecular surface electrostatics. JETC 4(2) (2008)

Joshua F. Apgar, Jared E. Toettcher, Drew Endy, Forest M. White, Bruce Tidor: Stimulus Design for Model Selection and Validation in Cell Signaling. PLoS Computational Biology 4(2) (2008)

A. Katharina Wilkins, Paul I. Barton, Bruce Tidor: The Per2 Negative Feedback Loop Sets the Period in the Mammalian Circadian Clock Mechanism. PLoS Computational Biology 3(12) (2007)

Michael D. Altman, Jaydeep P. Bardhan, Bruce Tidor, Jacob K. White: FFTSVD: A Fast Multiscale Boundary-Element Method Solver Suitable for Bio-MEMS and Biomolecule Simulation. IEEE Trans. on CAD of Integrated Circuits and Systems 25(2): 274-284 (2006)