Li-San Wang

Serita M. Nelesen, Kevin Liu, Li-San Wang, C. Randal Linder, Tandy Warnow: DACTAL: divide-and-conquer trees (almost) without alignments. Bioinformatics 28(12): 274-282 (2012)

Fan Li, Paul Ryvkin, Daniel M. Childress, Otto Valladares, Brian D. Gregory, Li-San Wang: SAVoR: a server for sequencing annotation and visualization of RNA structures. Nucleic Acids Research 40(Web-Server-Issue): 59-64 (2012)

Li-San Wang, James Leebens-Mack, P. Kerr Wall, Kevin Beckmann, Claude W. dePamphilis, Tandy Warnow: The Impact of Multiple Protein Sequence Alignment on Phylogenetic Estimation. IEEE/ACM Trans. Comput. Biology Bioinform. 8(4): 1108-1119 (2011)

Paul Ryvkin, Yuk Yee Leung, Li-San Wang, Brian D. Gregory: Invited: Multiclass RNA function classification using next-generation sequencing. ICCABS 2011: 10

Mingyao Li, Muredach P. Reilly, Daniel J. Rader, Li-San Wang: Correcting population stratification in genetic association studies using a phylogenetic approach. Bioinformatics 26(6): 798-806 (2010)

Shane T. Jensen, Sameer Soi, Li-San Wang: A Bayesian approach to efficient differential allocation for resampling-based significance testing. BMC Bioinformatics 10 (2009)

Li-San Wang, Tandy Warnow: Reconstructing Chromosomal Evolution. SIAM J. Comput. 36(1): 99-131 (2006)

Logan Everett, Li-San Wang, Sridhar Hannenhalli: Dense subgraph computation via stochastic search: application to detect transcriptional modules. ISMB (Supplement of Bioinformatics) 2006: 117-123

Stanislav Angelov, Boulos Harb, Sampath Kannan, Li-San Wang: Weighted isotonic regression under the L₁ norm. SODA 2006: 783-791

Luay Nakhleh, Li-San Wang: Phylogenetic Networks: Properties and Relationship to Trees and Clusters. T. Comp. Sys. Biology 2: 82-99 (2005)

Jijun Tang, Li-San Wang: Improving Genome Rearrangement Phylogeny Using Sequence-Style Parsimony. BIBE 2005: 137-144

Luay Nakhleh, Derek A. Ruths, Li-San Wang: RIATA-HGT: A Fast and Accurate Heuristic for Reconstructing Horizontal Gene Transfer. COCOON 2005: 84-93

Luay Nakhleh, Li-San Wang: Phylogenetic Networks, Trees, and Clusters. International Conference on Computational Science (2) 2005: 919-926

Sridhar Hannenhalli, Li-San Wang: Enhanced position weight matrices using mixture models. ISMB (Supplement of Bioinformatics) 2005: 204-212

Li-San Wang, Shane T. Jensen, Sridhar Hannenhalli: An Interaction-Dependent Model for Transcription Factor Binding. Systems Biology and Regulatory Genomics 2005: 225-234

Stanislav Angelov, Boulos Harb, Sampath Kannan, Sanjeev Khanna, Junhyong Kim, Li-San Wang: Genome Identification and Classification by Short Oligo Arrays. WABI 2004: 400-411

Matthew Spencer, Barbara Bordalejo, Li-San Wang, Adrian C. Barbrook, Linne R. Mooney, Peter Robinson, Tandy Warnow, Christopher J. Howe: Analyzing the Order of Items in Manuscripts of The Canterbury Tales. Computers and the Humanities 37(1): 97-109 (2003)

Bernard M. E. Moret, Li-San Wang, Tandy Warnow: Toward New Software for Computational Phylogenetics. IEEE Computer 35(7): 55-64 (2002)

Bernard M. E. Moret, Jijun Tang, Li-San Wang, Tandy Warnow: Steps toward accurate reconstructions of phylogenies from gene-order data. J. Comput. Syst. Sci. 65(3): 508-525 (2002)

Cara Stockham, Li-San Wang, Tandy Warnow: Statistically based postprocessing of phylogenetic analysis by clustering. ISMB 2002: 285-293

Li-San Wang, Robert K. Jansen, Bernard M. E. Moret, Linda A. Raubeson, Tandy Warnow: Fast Phylogenetic Methods for the Analysis of Genome Rearrangement Data: An Empirical Study. Pacific Symposium on Biocomputing 2002: 524-535

Li-San Wang: Genome Rearrangement Phylogeny Using Weighbor. WABI 2002: 112-125

Bernard M. E. Moret, Li-San Wang, Tandy Warnow, Stacia K. Wyman: New approaches for reconstructing phylogenies from gene order data. ISMB (Supplement of Bioinformatics) 2001: 165-173

Li-San Wang, Tandy Warnow: Estimating true evolutionary distances between genomes. STOC 2001: 637-646

Li-San Wang: Exact-IEBP: A New Technique for Estimating Evolutionary Distances between Whole Genomes. WABI 2001: 175-188

Mary E. Cosner, Robert K. Jansen, Bernard M. E. Moret, Linda A. Raubeson, Li-San Wang, Tandy Warnow, Stacia K. Wyman: A New Fast Heuristic for Computing the Breakpoint Phylogeny and Experimental Phylogenetic Analyses of Real and Synthetic Data. ISMB 2000: 104-115