Doreen Ware

Ken Youens-Clark, Edward S. Buckler, Terry M. Casstevens, Charles Chen, Genevieve DeClerck, Paul Derwent, Palitha Dharmawardhana, Pankaj Jaiswal, Paul Kersey, A. S. Karthikeyan, Jerry Lu, Susan McCouch, Liya Ren, William Spooner, Joshua C. Stein, Jim Thomason, Sharon Wei, Doreen Ware: Gramene database in 2010: updates and extensions. Nucleic Acids Research 39(Database-Issue): 1085-1094 (2011)

Rex T. Nelson, Shulamit Avraham, Randy C. Shoemaker, Gregory D. May, Doreen Ware, Damian Gessler: Applications and methods utilizing the Simple Semantic Web Architecture and Protocol (SSWAP) for bioinformatics resource discovery and disparate data and service integration. BioData Mining 3: 3 (2010)

Ken Youens-Clark, Benjamin Faga, Immanuel Yap, Lincoln Stein, Doreen Ware: CMap 1.01: a comparative mapping application for the Internet. Bioinformatics 25(22): 3040-3042 (2009)

Shulamit Avraham, Chih-Wei Tung, Katica Ilic, Pankaj Jaiswal, Elizabeth A. Kellogg, Susan McCouch, Anuradha Pujar, Leonore Reiser, Seung Yon Rhee, Martin M. Sachs, Mary Schaeffer, Lincoln Stein, Peter Stevens, Leszek Vincent, Felipe Zapata, Doreen Ware: The Plant Ontology Database: a community resource for plant structure and developmental stages controlled vocabulary and annotations. Nucleic Acids Research 36(Database-Issue): 449-454 (2008)

Chengzhi Liang, Pankaj Jaiswal, Claire Hebbard, Shuly Avraham, Edward S. Buckler, Terry M. Casstevens, Bonnie Hurwitz, Susan McCouch, Junjian Ni, Anuradha Pujar, Dean Ravenscroft, Liya Ren, William Spooner, Isaak Y. Tecle, Jim Thomason, Chih-Wei Tung, Xuehong Wei, Immanuel Yap, Ken Youens-Clark, Doreen Ware, Lincoln Stein: Gramene: a growing plant comparative genomics resource. Nucleic Acids Research 36(Database-Issue): 947-953 (2008)

Payan Canaran, Edward S. Buckler, Jeffrey Glaubitz, Lincoln Stein, Qi Sun, Wei Zhao, Doreen Ware: Panzea: an update on new content and features. Nucleic Acids Research 36(Database-Issue): 1041-1043 (2008)

Payan Canaran, Lincoln Stein, Doreen Ware: Look-Align: an interactive web-based multiple sequence alignment viewer with polymorphism analysis support. Bioinformatics 22(7): 885-886 (2006)

Pankaj Jaiswal, Junjian Ni, Immanuel Yap, Doreen Ware, William Spooner, Ken Youens-Clark, Liya Ren, Chengzhi Liang, Wei Zhao, Kiran Ratnapu, Benjamin Faga, Payan Canaran, Molly Fogleman, Claire Hebbard, Shuly Avraham, Steven Schmidt, Terry M. Casstevens, Edward S. Buckler, Lincoln Stein, Susan McCouch: Gramene: a bird's eye view of cereal genomes. Nucleic Acids Research 34(Database-Issue): 717-723 (2006)

Wei Zhao, Payan Canaran, Rebecca Jurkuta, Theresa Fulton, Jeffrey Glaubitz, Edward S. Buckler, John Doebley, Brandon Gaut, Major Goodman, Jim Holland, Stephen Kresovich, Michael D. McMullen, Lincoln Stein, Doreen Ware: Panzea: a database and resource for molecular and functional diversity in the maize genome. Nucleic Acids Research 34(Database-Issue): 752-757 (2006)

Christopher Maher, Marja Timmermans, Lincoln Stein, Doreen Ware: Identifying MicroRNAs in Plant Genomes. CSB 2004: 718-723

Doreen Ware, Pankaj Jaiswal, Junjian Ni, Xiaokang Pan, Kuan Chang, Kenneth Clark, Leonid Teytelman, Steven Schmidt, Wei Zhao, Samuel Cartinhour, Susan McCouch, Lincoln Stein: Gramene: a resource for comparative grass genomics. Nucleic Acids Research 30(1): 103-105 (2002)