Ross T. Whitaker

Jonathan R. Bronson, Joshua A. Levine, Ross T. Whitaker: Particle systems for adaptive, isotropic meshing of CAD models. Eng. Comput. (Lond.) 28(4): 331-344 (2012)

Tina Kapur, Steve Pieper, Ross T. Whitaker, Stephen R. Aylward, Marianna Jakab, William J. Schroeder, Ron Kikinis: The National Alliance for Medical Image Computing, a roadmap initiative to build a free and open source software infrastructure for translational research in medical image analysis. JAMIA 19(2): 176-180 (2012)

Manasi Datar, Prasanna Muralidharan, Abhishek Kumar, Sylvain Gouttard, Joseph Piven, Guido Gerig, Ross T. Whitaker, P. Thomas Fletcher: Mixed-Effects Shape Models for Estimating Longitudinal Changes in Anatomy. STIA 2012: 76-87

Suyash P. Awate, Peihong Zhu, Ross T. Whitaker: How Many Templates Does It Take for a Good Segmentation?: Error Analysis in Multiatlas Segmentation as a Function of Database Size. MBIA 2012: 103-114

Yongsheng Pan, Won-Ki Jeong, Ross T. Whitaker: Markov surfaces: A probabilistic framework for user-assisted three-dimensional image segmentation. Computer Vision and Image Understanding 115(10): 1375-1383 (2011)

Zhisong Fu, Won-Ki Jeong, Yongsheng Pan, Robert M. Kirby, Ross T. Whitaker: A Fast Iterative Method for Solving the Eikonal Equation on Triangulated Surfaces. SIAM J. Scientific Computing 33(5): 2468-2488 (2011)

Xiang Hao, Ross T. Whitaker, P. Thomas Fletcher: Adaptive Riemannian Metrics for Improved Geodesic Tracking of White Matter. IPMI 2011: 13-24

Manasi Datar, Yaniv Gur, Beatriz Paniagua, Martin Styner, Ross T. Whitaker: Geometric Correspondence for Ensembles of Nonregular Shapes. MICCAI (2) 2011: 368-375

Peihong Zhu, Suyash P. Awate, Samuel Gerber, Ross T. Whitaker: Fast Shape-Based Nearest-Neighbor Search for Brain MRIs Using Hierarchical Feature Matching. MICCAI (2) 2011: 484-491

Samuel Gerber, Tolga Tasdizen, P. Thomas Fletcher, Sarang C. Joshi, Ross T. Whitaker: Manifold modeling for brain population analysis. Medical Image Analysis 14(5): 643-653 (2010)

Elizabeth Jurrus, António R. C. Paiva, Shigeki Watanabe, James R. Anderson, Bryan W. Jones, Ross T. Whitaker, Erik M. Jorgensen, Robert Marc, Tolga Tasdizen: Detection of neuron membranes in electron microscopy images using a serial neural network architecture. Medical Image Analysis 14(6): 770-783 (2010)

P. Thomas Fletcher, Ross T. Whitaker, Ran Tao, Molly B. DuBray, Alyson Froehlich, Caitlin Ravichandran, Andrew L. Alexander, Erin D. Bigler, Nicholas T. Lange, Janet E. Lainhart: Microstructural connectivity of the arcuate fasciculus in adolescents with high-functioning autism. NeuroImage 51(3): 1117-1125 (2010)

Samuel Gerber, Peer-Timo Bremer, Valerio Pascucci, Ross T. Whitaker: Visual Exploration of High Dimensional Scalar Functions. IEEE Trans. Vis. Comput. Graph. 16(6): 1271-1280 (2010)

Ganesh Adluru, Tolga Tasdizen, Ross T. Whitaker, Edward V. R. Di Bella: Improving Undersampled MRI Reconstruction Using Non-local Means. ICPR 2010: 4000-4003

Yuntao Jia, Xinlai Ni, Eric Lorimer, Michael Mullan, Ross T. Whitaker, John C. Hart: RBF Dipole Surface Evolution. Shape Modeling International 2010: 143-150

Ross T. Whitaker: Editorial. Medical Image Analysis 13(1): 131 (2009)

Elizabeth Jurrus, Melissa Hardy, Tolga Tasdizen, P. Thomas Fletcher, Pavel Koshevoy, Chi-Bin Chien, Winfried Denk, Ross T. Whitaker: Axon tracking in serial block-face scanning electron microscopy. Medical Image Analysis 13(1): 180-188 (2009)

Oliver Nemitz, Michael Bang Nielsen, Martin Rumpf, Ross T. Whitaker: Finite Element Methods on Very Large, Dynamic Tubular Grid Encoded Implicit Surfaces. SIAM J. Scientific Computing 31(3): 2258-2281 (2009)

Won-Ki Jeong, Johanna Beyer, Markus Hadwiger, Amelio Vázquez Reina, Hanspeter Pfister, Ross T. Whitaker: Scalable and Interactive Segmentation and Visualization of Neural Processes in EM Datasets. IEEE Trans. Vis. Comput. Graph. 15(6): 1505-1514 (2009)

Samuel Gerber, Tolga Tasdizen, Ross T. Whitaker: Dimensionality reduction and principal surfaces via Kernel Map Manifolds. ICCV 2009: 529-536

Ipek Oguz, Marc Niethammer, Joshua E. Cates, Ross T. Whitaker, P. Thomas Fletcher, Clement Vachet, Martin Styner: Cortical Correspondence with Probabilistic Fiber Connectivity. IPMI 2009: 651-663

Ran Tao, P. Thomas Fletcher, Samuel Gerber, Ross T. Whitaker: A Variational Image-Based Approach to the Correction of Susceptibility Artifacts in the Alignment of Diffusion Weighted and Structural MRI. IPMI 2009: 664-675

James R. Anderson, Bryan W. Jones, Jia-Hui Yang, Maggie V. Shaw, Carl B. Watt, Paul Koshevoy, Joël Spaltenstein, Elizabeth Jurrus, Kannan Umadevi Venkataraju, Ross T. Whitaker, David N. Mastronarde, Tolga Tasdizen, Robert Marc: Ultrastructural Mapping of Neural Circuitry: A Computational Framework. ISBI 2009: 1135-1137

Manasi Datar, Joshua E. Cates, P. Thomas Fletcher, Sylvain Gouttard, Guido Gerig, Ross T. Whitaker: Particle Based Shape Regression of Open Surfaces with Applications to Developmental Neuroimaging. MICCAI (1) 2009: 167-174

Samuel Gerber, Tolga Tasdizen, Sarang C. Joshi, Ross T. Whitaker: On the Manifold Structure of the Space of Brain Images. MICCAI (1) 2009: 305-312

Won-Ki Jeong, Ross T. Whitaker: A Fast Iterative Method for Eikonal Equations. SIAM J. Scientific Computing 30(5): 2512-2534 (2008)

Miriah D. Meyer, Ross T. Whitaker, Robert M. Kirby, Christian Ledergerber, Hanspeter Pfister: Particle-based Sampling and Meshing of Surfaces in Multimaterial Volumes. IEEE Trans. Vis. Comput. Graph. 14(6): 1539-1546 (2008)

Joshua E. Cates, P. Thomas Fletcher, Zachary Warnock, Ross T. Whitaker: A shape analysis framework for small animal phenotyping with application to mice with a targeted disruption of Hoxd11. ISBI 2008: 512-515

Elizabeth Jurrus, Ross T. Whitaker, Bryan W. Jones, Robert Marc, Tolga Tasdizen: An optimal-path approach for neural circuit reconstruction. ISBI 2008: 1609-1612

Ipek Oguz, Joshua E. Cates, P. Thomas Fletcher, Ross T. Whitaker, Derek Cool, Stephen R. Aylward, Martin Andreas Styner: Cortical correspondence using entropy-based particle systems and local features. ISBI 2008: 1637-1640

Joshua E. Cates, P. Thomas Fletcher, Martin Styner, Heather Cody Hazlett, Ross T. Whitaker: Particle-Based Shape Analysis of Multi-object Complexes. MICCAI (1) 2008: 477-485

Oliver Nemitz, Martin Rumpf, Tolga Tasdizen, Ross T. Whitaker: Anisotropic Curvature Motion for Structure Enhancing Smoothing of 3D MR Angiography Data. Journal of Mathematical Imaging and Vision 27(3): 217-229 (2007)

Suyash P. Awate, Ross T. Whitaker: Feature-Preserving MRI Denoising: A Nonparametric Empirical Bayes Approach. IEEE Trans. Med. Imaging 26(9): 1242-1255 (2007)

Gordon L. Kindlmann, Daniel B. Ennis, Ross T. Whitaker, Carl-Fredrik Westin: Diffusion Tensor Analysis With Invariant Gradients and Rotation Tangents. IEEE Trans. Med. Imaging 26(11): 1483-1499 (2007)

Miriah D. Meyer, Blake Nelson, Robert M. Kirby, Ross T. Whitaker: Particle Systems for Efficient and Accurate High-Order Finite Element Visualization. IEEE Trans. Vis. Comput. Graph. 13(5): 1015-1026 (2007)

Won-Ki Jeong, P. Thomas Fletcher, Ran Tao, Ross T. Whitaker: Interactive Visualization of Volumetric White Matter Connectivity in DT-MRI Using a Parallel-Hardware Hamilton-Jacobi Solver. IEEE Trans. Vis. Comput. Graph. 13(6): 1480-1487 (2007)

Miriah D. Meyer, Robert M. Kirby, Ross T. Whitaker: Topology, Accuracy, and Quality of Isosurface Meshes Using Dynamic Particles. IEEE Trans. Vis. Comput. Graph. 13(6): 1704-1711 (2007)

Samuel Gerber, Tolga Tasdizen, Ross T. Whitaker: Robust non-linear dimensionality reduction using successive 1-dimensional Laplacian Eigenmaps. ICML 2007: 281-288

Joshua E. Cates, P. Thomas Fletcher, Martin Andreas Styner, Martha Elizabeth Shenton, Ross T. Whitaker: Shape Modeling and Analysis with Entropy-Based Particle Systems. IPMI 2007: 333-345

P. Thomas Fletcher, Ran Tao, Won-Ki Jeong, Ross T. Whitaker: A Volumetric Approach to Quantifying Region-to-Region White Matter Connectivity in Diffusion Tensor MRI. IPMI 2007: 346-358

Ganesh Adluru, Ross T. Whitaker, Edward V. R. Di Bella: Spatio-Temporal Constrained Reconstruction of Sparse Dynamic Contrast Enhanced Radial Mri Data. ISBI 2007: 109-112

Oliver Nemitz, Michael Bang Nielsen, Martin Rumpf, Ross T. Whitaker: Narrow Band Methods for PDEs on Very Large Implicit Surface. VMV 2007: 171-180

Suyash P. Awate, Tolga Tasdizen, Norman L. Foster, Ross T. Whitaker: Adaptive Markov modeling for mutual-information-based, unsupervised MRI brain-tissue classification. Medical Image Analysis 10(5): 726-739 (2006)

Suyash P. Awate, Ross T. Whitaker: Unsupervised, Information-Theoretic, Adaptive Image Filtering for Image Restoration. IEEE Trans. Pattern Anal. Mach. Intell. 28(3): 364-376 (2006)

Suyash P. Awate, Tolga Tasdizen, Ross T. Whitaker: Unsupervised Texture Segmentation with Nonparametric Neighborhood Statistics. ECCV (2) 2006: 494-507

Ganesh Adluru, Edward V. R. Di Bella, Ross T. Whitaker: Automatic segmentation of cardiac short axis slices in perfusion. ISBI 2006: 133-136

Saurav Basu, P. Thomas Fletcher, Ross T. Whitaker: Rician Noise Removal in Diffusion Tensor MRI. MICCAI (1) 2006: 117-125

Ken Museth, David E. Breen, Ross T. Whitaker, Sean Mauch, David Johnson: Algorithms for Interactive Editing of Level Set Models. Comput. Graph. Forum 24(4): 821-841 (2005)

Joshua E. Cates, Ross T. Whitaker, Greg M. Jones: Case study: an evaluation of user-assisted hierarchical watershed segmentation. Medical Image Analysis 9(6): 566-578 (2005)

Suyash P. Awate, Ross T. Whitaker: Higher-Order Image Statistics for Unsupervised, Information-Theoretic, Adaptive, Image Filtering. CVPR (2) 2005: 44-51

Tolga Tasdizen, Ross T. Whitaker, Robert Marc, Bryan W. Jones: Enhancement of cell boundaries in transmission electron microscopy images. ICIP (2) 2005: 129-132

Leo Grady, Tolga Tasdizen, Ross T. Whitaker: A geometric multigrid approach to solving the 2D inhomogeneous Laplace equation with internal Dirichlet boundary conditions. ICIP (2) 2005: 642-645

Suyash P. Awate, Ross T. Whitaker: Nonparametric Neighborhood Statistics for MRI Denoising. IPMI 2005: 677-688

Tolga Tasdizen, Suyash P. Awate, Ross T. Whitaker, Norman L. Foster: MRI Tissue Classification with Neighborhood Statistics: A Nonparametric, Entropy-Minimizing Approach. MICCAI (2) 2005: 517-525

Miriah D. Meyer, Pierre Georgel, Ross T. Whitaker: Robust Particle Systems for Curvature Dependent Sampling of Implicit Surfaces. SMI 2005: 124-133

David E. Breen, Mike Kirby, Aaron E. Lefohn, Ken Museth, Tobias Preusser, Guillermo Sapiro, Ross T. Whitaker: Level Set and PDE Methods for Visualization. IEEE Visualization 2005: 125

Ross T. Whitaker: Modeling Deformable Surfaces with Level Sets. IEEE Computer Graphics and Applications 24(5): 6-9 (2004)

Joshua E. Cates, Aaron E. Lefohn, Ross T. Whitaker: GIST: an interactive, GPU-based level set segmentation tool for 3D medical images. Medical Image Analysis 8(3): 217-231 (2004)

Tolga Tasdizen, Ross T. Whitaker: Higher-Order Nonlinear Priors for Surface Reconstruction. IEEE Trans. Pattern Anal. Mach. Intell. 26(7): 878-891 (2004)

Aaron E. Lefohn, Joe Michael Kniss, Charles D. Hansen, Ross T. Whitaker: A Streaming Narrow-Band Algorithm: Interactive Computation and Visualization of Level Sets. IEEE Trans. Vis. Comput. Graph. 10(4): 422-433 (2004)

Alexey Chernyavskiy, Ross T. Whitaker: A Geometric Approach to Parameter Estimation from Tomographic Data. ISBI 2004: 752-755

Jon D. Genetti, Michael J. Bailey, David H. Laidlaw, Robert J. Moorhead, Ross T. Whitaker: Panel 4: What Should We Teach in a Scientific Visualization Class? IEEE Visualization 2004: 573-575

Simon Premoze, Tolga Tasdizen, James Bigler, Aaron E. Lefohn, Ross T. Whitaker: Particle-Based Simulation of Fluids. Comput. Graph. Forum 22(3): 401-410 (2003)

Leonid Zhukov, Ken Museth, David E. Breen, Alan H. Barr, Ross T. Whitaker: Level set modeling and segmentation of diffusion tensor magnetic resonance imaging brain data. J. Electronic Imaging 12(1): 125-133 (2003)

Tolga Tasdizen, Ross T. Whitaker, Paul Burchard, Stanley Osher: Geometric surface processing via normal maps. ACM Trans. Graph. 22(4): 1012-1033 (2003)

Tolga Tasdizen, Ross T. Whitaker: Cramer-Rao Bounds for Nonparametric Surface Reconstruction from Range Data. 3DIM 2003: 70-78

Tolga Tasdizen, Ross T. Whitaker: Anisotropic diffusion of surface normals for feature preserving surface reconstruction. 3DIM 2003: 353-360

Aaron E. Lefohn, Joshua E. Cates, Ross T. Whitaker: Interactive, GPU-Based Level Sets for 3D Segmentation. MICCAI (1) 2003: 564-572

Aaron E. Lefohn, Joe Michael Kniss, Charles D. Hansen, Ross T. Whitaker: Interactive Deformation and Visualization of Level Set Surfaces Using Graphics Hardware. IEEE Visualization 2003: 75-82

Gordon L. Kindlmann, Ross T. Whitaker, Tolga Tasdizen, Torsten Möller: Curvature-Based Transfer Functions for Direct Volume Rendering: Methods and Applications. IEEE Visualization 2003: 513-520

Ross T. Whitaker, Vidya Elangovan: A direct approach to estimating surfaces in tomographic data. Medical Image Analysis 6(3): 235-249 (2002)

Ross T. Whitaker, Jens Gregor: A Maximum-Likelihood Surface Estimator for Dense Range Data. IEEE Trans. Pattern Anal. Mach. Intell. 24(10): 1372-1387 (2002)

Ross T. Whitaker, Ernesto Lautaro Juarez-Valdes: On the reconstruction of height functions and terrain maps from dense range data. IEEE Transactions on Image Processing 11(7): 704-716 (2002)

Ken Museth, David E. Breen, Ross T. Whitaker, Alan H. Barr: Level set surface editing operators. ACM Trans. Graph. 21(3): 330-338 (2002)

Ken Museth, David E. Breen, Ross T. Whitaker, Alan H. Barr: Level set surface editing operators. SIGGRAPH 2002: 330-338

Tolga Tasdizen, Ross T. Whitaker, Paul Burchard, Stanley Osher: Geometric Surface Smoothing via Anisotropic Diffusion of Normals. IEEE Visualization 2002: 125-132

Ken Museth, David E. Breen, Leonid Zhukov, Ross T. Whitaker: Level-Set Segmentation From Multiple Non-Uniform Volume Datasets. IEEE Visualization 2002: 179-186

David E. Breen, Sean Mauch, Ross T. Whitaker, Jia Mao: 3D Metamorphosis Between Different Types of Geometric Models. Comput. Graph. Forum 20(3): 36-48 (2001)

Jens Gregor, Ross T. Whitaker: Indoor Scene Reconstruction from Sets of Noisy Range Images. Graphical Models 63(5): 304-332 (2001)

David E. Breen, Ross T. Whitaker: A Level-Set Approach for the Metamorphosis of Solid Models. IEEE Trans. Vis. Comput. Graph. 7(2): 173-192 (2001)

Ross T. Whitaker, Xinwei Xue: Variable-conductance, level-set curvature for image denoising. ICIP (3) 2001: 142-145

Vidya Elangovan, Ross T. Whitaker: From Sinograms to Surfaces: A Direct Approach to the Segmentation of Tomographic Data. MICCAI 2001: 213-223

Ross T. Whitaker, David E. Breen, Ken Museth, Neha Soni: A Framework for Level Set Segmentation of Volume Datasets. Volume Graphics 2001

Ross T. Whitaker: Maximum Likelihood Surface Estimation. VMV 2001: 463-464

Ross T. Whitaker: A level-set approach to image blending. IEEE Transactions on Image Processing 9(11): 1849-1861 (2000)

Ross T. Whitaker: Reducing aliasing artifacts in iso-surfaces of binary volumes. Volviz 2000: 23-32

D. L. Elsner, Ross T. Whitaker, Mongi A. Abidi: Volumetric Reconstruction of Objects and Scenes Using Range Images. Digital Signal Processing 9(2): 120-135 (1999)

Alan P. Mangan, Ross T. Whitaker: Partitioning 3D Surface Meshes Using Watershed Segmentation. IEEE Trans. Vis. Comput. Graph. 5(4): 308-321 (1999)

Ross T. Whitaker, Jens Gregor, P. F. Chen: Indoor Scene Reconstruction from Sets of Noisy Range Images. 3DIM 1999: 348-357

Ross T. Whitaker: A Level-Set Approach to 3D Reconstruction from Range Data. International Journal of Computer Vision 29(3): 203-231 (1998)

David E. Breen, Sean Mauch, Ross T. Whitaker: 3D Scan Conversion of CSG Models into Distance Volumes. VVS 1998: 7-14

Gudrun Klinker, Klaus H. Ahlers, David E. Breen, Pierre-Yves Chevalier, Chris Crampton, Douglas S. Greer, Dieter Koller, André Kramer, Eric Rose, Mihran Tuceryan, Ross T. Whitaker: Confluence of Computer Vision and Interactrive Graphics for Augmented Reality. Presence 6(4): 433-451 (1997)

Dieter Koller, Gudrun Klinker, Eric Rose, David E. Breen, Ross T. Whitaker, Mihran Tuceryan: Automated Camera Calibration and 3D Egomotion Estimation for Augmented Reality Applications. CAIP 1997: 199-206

Dieter Koller, Gudrun Klinker, Eric Rose, David E. Breen, Ross T. Whitaker, Mihran Tuceryan: Real-time vision-based camera tracking for augmented reality applications. VRST 1997: 87-94

David E. Breen, Ross T. Whitaker, Eric Rose, Mihran Tuceryan: Interactive Occlusion and Automatic Object Placement for Augmented Reality. Comput. Graph. Forum 15(3): 11-22 (1996)

Klaus H. Ahlers, André Kramer, David E. Breen, Pierre-Yves Chevalier, Chris Crampton, Eric Rose, Mihran Tuceryan, Ross T. Whitaker, Douglas S. Greer: Distributed Augmented Reality for Collaborative Design Applications. Comput. Graph. Forum 14(3): 3-14 (1995)

Ross T. Whitaker, Chris Crampton, David E. Breen, Mihran Tuceryan, Eric Rose: Object Calibration for Augmented Reality. Comput. Graph. Forum 14(3): 15-28 (1995)

Wesley E. Snyder, Youn-Sik Han, Griff L. Bilbro, Ross T. Whitaker, Stephen M. Pizer: Image Relaxation: Restoration and Feature Extraction. IEEE Trans. Pattern Anal. Mach. Intell. 17(6): 620-624 (1995)

Mihran Tuceryan, Douglas S. Greer, Ross T. Whitaker, David E. Breen, Eric Rose, Klaus H. Ahlers, Chris Crampton: Calibration Requirements and Procedures for a Monitor-Based Augmented Reality System. IEEE Trans. Vis. Comput. Graph. 1(3): 255-273 (1995)

Ross T. Whitaker: Algorithms for Implicit Deformable Models. ICCV 1995: 822-827

Ross T. Whitaker: Characterizing First and Second-Order Patches Using Geometry-Limited Diffusion. IPMI 1993: 149-167

Terry S. Yoo, Ulrich Neumann, Henry Fuchs, Stephen M. Pizer, Tim J. Cullip, John Rhoades, Ross T. Whitaker: Achieving Direct Volume Visualization with Interactive Semantic Region Selection. IEEE Visualization 1991: 58-67