Erik Winfree

Damien Woods, Ho-Lin Chen, Scott Goodfriend, Nadine Dabby, Erik Winfree, Peng Yin: Active self-assembly of algorithmic shapes and patterns in polylogarithmic time. ITCS 2013: 353-354

Damien Woods, Ho-Lin Chen, Scott Goodfriend, Nadine Dabby, Erik Winfree, Peng Yin: Active Self-Assembly of Algorithmic Shapes and Patterns in Polylogarithmic Time. CoRR abs/1301.2626 (2013)

Rebecca Schulman, Erik Winfree: Simple evolution of complex crystal species. Natural Computing 11(2): 187-197 (2012)

David Soloveichik, Erik Winfree: Erratum to "The computational power of Benenson automata" [Theoret. Comput. Sci. 344 (2005) 279-297]. Theor. Comput. Sci. 412(43): 6112-6113 (2011)

Douglas Densmore, Mark Horowitz, Smita Krishnaswamy, Xiling Shen, Adam Arkin, Erik Winfree, Chris Voigt: Joint DAC/IWBDA special session design and synthesis of biological circuits. DAC 2011: 114-115

Lulu Qian, David Soloveichik, Erik Winfree: Efficient Turing-Universal Computation with DNA Polymers. DNA 2010: 123-140

Rebecca Schulman, Erik Winfree: Simple Evolution of Complex Crystal Species. DNA 2010: 147-161

Kenichi Fujibayashi, David Yu Zhang, Erik Winfree, Satoshi Murata: Error suppression mechanisms for DNA tile self-assembly and their simulation. Natural Computing 8(3): 589-612 (2009)

Rebecca Schulman, Erik Winfree: Programmable Control of Nucleation for Algorithmic Self-Assembly. SIAM J. Comput. 39(4): 1581-1616 (2009)

David Soloveichik, Matthew Cook, Erik Winfree: Combining self-healing and proofreading in self-assembly. Natural Computing 7(2): 203-218 (2008)

Rebecca Schulman, Erik Winfree: How crystals that sense and respond to their environments could evolve. Natural Computing 7(2): 219-237 (2008)

David Soloveichik, Matthew Cook, Erik Winfree, Jehoshua Bruck: Computation with finite stochastic chemical reaction networks. Natural Computing 7(4): 615-633 (2008)

Erik Winfree: Toward molecular programming with DNA. ASPLOS 2008: 1

David Soloveichik, Georg Seelig, Erik Winfree: DNA as a Universal Substrate for Chemical Kinetics. DNA 2008: 57-69

Lulu Qian, Erik Winfree: A Simple DNA Gate Motif for Synthesizing Large-Scale Circuits. DNA 2008: 70-89

David Soloveichik, Erik Winfree: Complexity of Self-Assembled Shapes. SIAM J. Comput. 36(6): 1544-1569 (2007)

Erik Winfree: Self-healing Tile Sets. Nanotechnology: Science and Computation 2006: 55-78

Erik Winfree: Fault-Tolerance in Biochemical Systems. UC 2006: 26

David Soloveichik, Erik Winfree: The computational power of Benenson automata. Theor. Comput. Sci. 344(2-3): 279-297 (2005)

David Soloveichik, Erik Winfree: Complexity of Compact Proofreading for Self-assembled Patterns. DNA 2005: 305-324

Rebecca Schulman, Erik Winfree: Self-replication and Evolution of DNA Crystals. ECAL 2005: 734-743

Rebecca Schulman, Erik Winfree: Programmable Control of Nucleation for Algorithmic Self-assembly. DNA 2004: 319-328

Georg Seelig, Bernard Yurke, Erik Winfree: DNA Hybridization Catalysts and Catalyst Circuits. DNA 2004: 329-343

David Soloveichik, Erik Winfree: Complexity of Self-assembled Shapes. DNA 2004: 344-354

Jongmin Kim, John J. Hopfield, Erik Winfree: Neural Network Computation by In Vitro Transcriptional Circuits. NIPS 2004

David Soloveichik, Erik Winfree: Complexity of Self-Assembled Shapes. CoRR abs/cs/0412096 (2004)

David Soloveichik, Erik Winfree: The Computational Power of Benenson Automata. CoRR abs/cs/0412097 (2004)

Matthew Cook, Paul W. K. Rothemund, Erik Winfree: Self-Assembled Circuit Patterns. DNA 2003: 91-107

Rebecca Schulman, Shaun Lee, Nick Papadakis, Erik Winfree: One Dimensional Boundaries for DNA Tile Self-Assembly. DNA 2003: 108-126

Erik Winfree, Renat Bekbolatov: Proofreading Tile Sets: Error Correction for Algorithmic Self-Assembly. DNA 2003: 126-144

Erik Winfree, Tony Eng, Grzegorz Rozenberg: String Tile Models for DNA Computing by Self-Assembly. DNA Computing 2000: 63-88

Paul W. K. Rothemund, Erik Winfree: The program-size complexity of self-assembled squares (extended abstract). STOC 2000: 459-468

Erik Winfree: In-vitro Transcriptional Circuits. UMC 2000: 121-122

Leonard M. Adleman, Paul W. K. Rothemund, Sam T. Roweis, Erik Winfree: On Applying Molecular Computation to the Data Encryption Standard. Journal of Computational Biology 6(1): 53-63 (1999)

Sam T. Roweis, Erik Winfree: On the Reduction of Errors in DNA Computation. Journal of Computational Biology 6(1): 65-75 (1999)

Sam T. Roweis, Erik Winfree, Richard Burgoyne, Nickolas V. Chelyapov, Myron F. Goodman, Paul W. K. Rothemund, Leonard M. Adleman: A Sticker-Based Model for DNA Computation. Journal of Computational Biology 5(4): 615-629 (1998)