Tomoyuki Yamada

Tomoyuki Yamada: Dynamic Logic of Propositional Commitments. Between Logic and Reality 2012: 183-200

Budrul Ahsan, Daisuke Kobayashi, Tomoyuki Yamada, Masahiro Kasahara, Shin Sasaki, Taro L. Saito, Yukinobu Nagayasu, Koichiro Doi, Yoichiro Nakatani, Wei Qu, Tomoko Jindo, Atsuko Shimada, Kiyoshi Naruse, Atsushi Toyoda, Yoko Kuroki, Asao Fujiyama, Takashi Sasaki, Atsushi Shimizu, Shuichi Asakawa, Nobuyoshi Shimizu, Shin-ichi Hashimoto, Jun Yang, Yongjun Lee, Kouji Matsushima, Sumio Sugano, Mitsuru Sakaizumi, Takanori Narita, Kazuko Ohishi, Shinobu Haga, Fumiko Ohta, Hisayo Nomoto, Keiko Nogata, Tomomi Morishita, Tomoko Endo, Tadasu Shin-I, Hiroyuki Takeda, Yuji Kohara, Shinichi Morishita: UTGB/medaka: genomic resource database for medaka biology. Nucleic Acids Research 36(Database-Issue): 747-752 (2008)

Tomoyuki Yamada: Logical dynamics of some speech acts that affect obligations and preferences. Synthese 165(2): 295-315 (2008)

Tomoyuki Yamada: Acts of Promising in Dynamified Deontic Logic. JSAI 2007: 95-108

Tomoyuki Yamada, Haruhiko Soma, Shinichi Morishita: PrimerStation: a highly specific multiplex genomic PCR primer design server for the human genome. Nucleic Acids Research 34(Web-Server-Issue): 665-669 (2006)

Tomoyuki Yamada: Acts of Commanding and Changing Obligations. CLIMA 2006: 1-19

Tomoyuki Yamada: Logical Dynamics of Commands and Obligations. JSAI 2006: 133-146

Tomoyuki Yamada, Shinichi Morishita: Accelerated off-target search algorithm for siRNA. Bioinformatics 21(8): 1316-1324 (2005)

Yasuhiro Kasai, Shin-ichi Hashimoto, Tomoyuki Yamada, Jun Sese, Sumio Sugano, Kouji Matsushima, Shinichi Morishita: 5'SAGE: 5'-end Serial Analysis of Gene Expression database. Nucleic Acids Research 33(Database-Issue): 550-552 (2005)

Yuki Naito, Tomoyuki Yamada, Takahiro Matsumiya, Kumiko Ui-Tei, Kaoru Saigo, Shinichi Morishita: dsCheck: highly sensitive off-target search software for double-stranded RNA-mediated RNA interference. Nucleic Acids Research 33(Web-Server-Issue): 589-591 (2005)

Tomoyuki Yamada, Shinichi Morishita: Computing Highly Specific and Noise-tolerant Oligomers Efficiently. J. Bioinformatics and Computational Biology 2(1): 21-46 (2004)

Yuki Naito, Tomoyuki Yamada, Kumiko Ui-Tei, Shinichi Morishita, Kaoru Saigo: siDirect: highly effective, target-specific siRNA design software for mammalian RNA interference. Nucleic Acids Research 32(Web-Server-Issue): 124-129 (2004)

Tomoyuki Yamada, Shinichi Morishita: Computing Highly Specific and Mismatch Tolerant Oligomers Efficiently. CSB 2003: 316-325

Toshihiko Honkura, Jun Ogasawara, Tomoyuki Yamada, Shinichi Morishita: The Gene Resource Locator: gene locus maps for transcriptome analysis. Nucleic Acids Research 30(1): 221-225 (2002)

Tomoyuki Yamada, Toyohide Watanabe: Identification of Person Objects in Four-Scenes Comics of Japanese Newspapers. GREC 1999: 155-166