Hong Yu

Guoyin Wang, Andrzej Skowron, Yiyu Yao, Hong Yu: Preface. Fundam. Inform. 115(2-3) (2012)

Hong Yu, Shuangshuang Chu, Dachun Yang: Autonomous Knowledge-oriented Clustering Using Decision-Theoretic Rough Set Theory. Fundam. Inform. 115(2-3): 141-156 (2012)

Hong Yu, Jingsha He, Ting Zhang, Peng Xiao: A Group Key Distribution Scheme for Wireless Sensor Networks in the Internet of Things Scenario. IJDSN 2012 (2012)

Ting Zhang, Jingsha He, Hong Yu: Secure Localization in Wireless Sensor Networks with Mobile Beacons. IJDSN 2012 (2012)

Balaji Polepalli Ramesh, Rashmi Prasad, Tim Miller, Brian Harrington, Hong Yu: Automatic discourse connective detection in biomedical text. JAMIA 19(5): 800-808 (2012)

Hong Yu, Jingsha He: Trust-based Mutual Authentication for Bootstrapping in 6LoWPAN. JCM 7(8): 634-642 (2012)

Hong Yu, Mark O. Riedl: A sequential recommendation approach for interactive personalized story generation. AAMAS 2012: 71-78

Yan Jiang, Zhilu Wang, Jinxiu Chu, Hong Yu, Ting Han, Xin Zhao, Shuying Han: Evaluating System of Treatment of Quercetin and Resveratrol Mixture in Type 2 Diabetic Rats. ICICA (2) 2012: 583-589

Yan Jiang, Jian Chang, Jing Bai, Hong Yu, Jinxiu Chu, Ting Han, Xin Zhao, Shuying Han: Medical Image Analysis in Treatment of Quercetin and Resveratrol Mixture on Type 2 Diabetic Cardiomyopathy Rats. ICICA (2) 2012: 590-595

Xiaowei Zhao, Haoxiang Xia, Hong Yu, Linlin Tian: Agents' Cooperation Based on Long-Term Reciprocal Altruism. IEA/AIE 2012: 689-698

Hong Yu, Xianchao Zhang, Yuansheng Yang, Xiaowei Zhao, Lei Cai: An Extended ISOMAP by Enhancing Similarity for Clustering. IEA/AIE 2012: 808-815

Xi'ao Ma, Guoyin Wang, Hong Yu: Multiple-Category Attribute Reduct Using Decision-Theoretic Rough Set Model. RSCTC 2012: 267-276

Hong Yu, Ying Wang: Three-Way Decisions Method for Overlapping Clustering. RSCTC 2012: 277-286

Tian-rui Li, Hung Son Nguyen, Guoyin Wang, Jerzy W. Grzymala-Busse, Ryszard Janicki, Aboul Ella Hassanien, Hong Yu (Eds.): Rough Sets and Knowledge Technology - 7th International Conference, RSKT 2012, Chengdu, China, August 17-20, 2012. Proceedings. Lecture Notes in Computer Science 7414, Springer 2012, isbn 978-3-642-31899-3

Hong Yu: A Multiple Access Protocol for Multimedia Transmission over Wireless Networks. CoRR abs/1205.4959 (2012)

Shashank Agarwal, Hong Yu: Figure summarizer browser extensions for PubMed Central. Bioinformatics 27(12): 1723-1724 (2011)

Jialiang Huang, Yi Liu, Wei Zhang, Hong Yu, Jing-Dong J. Han: eResponseNet: a package prioritizing candidate disease genes through cellular pathways. Bioinformatics 27(16): 2319-2320 (2011)

Rashmi Prasad, Susan McRoy, Nadya Frid, Aravind K. Joshi, Hong Yu: The Biomedical Discourse Relation Bank. BMC Bioinformatics 12: 188 (2011)

Shashank Agarwal, Hong Yu, Isaac S. Kohane: BioNOT: A searchable database of biomedical negated sentences. BMC Bioinformatics 12: 420 (2011)

Shashank Agarwal, Feifan Liu, Hong Yu: Simple and efficient machine learning frameworks for identifying protein-protein interaction relevant articles and experimental methods used to study the interactions. BMC Bioinformatics 12(S-8): S10 (2011)

Qing Zhang, Yonggang Cao, Hong Yu: Parsing citations in biomedical articles using conditional random fields. Comp. in Bio. and Med. 41(4): 190-194 (2011)

Hong Yu, Hu Luo: A novel possibilistic fuzzy leader clustering algorithm. Int. J. Hybrid Intell. Syst. 8(1): 31-40 (2011)

Feifan Liu, Gökhan Tür, Dilek Hakkani-Tür, Hong Yu: Towards spoken clinical-question answering: evaluating and adapting automatic speech-recognition systems for spoken clinical questions. JAMIA 18(5): 625-630 (2011)

Yonggang Cao, Feifan Liu, Pippa Simpson, Lamont D. Antieau, Andrew Bennett, James J. Cimino, John W. Ely, Hong Yu: AskHERMES: An online question answering system for complex clinical questions. Journal of Biomedical Informatics 44(2): 277-288 (2011)

Daehyun Kim, Balaji Polepalli Ramesh, Hong Yu: Automatic figure classification in bioscience literature. Journal of Biomedical Informatics 44(5): 848-858 (2011)

Feifan Liu, Lamont D. Antieau, Hong Yu: Toward automated consumer question answering: Automatically separating consumer questions from professional questions in the healthcare domain. Journal of Biomedical Informatics 44(6): 1032-1038 (2011)

Xianchao Zhang, Jingwei Li, Hong Yu: Local density adaptive similarity measurement for spectral clustering. Pattern Recognition Letters 32(2): 352-358 (2011)

Hong Yu, Guoyin Wang, Fakuan Lan: Solving the Attribute Reduction Problem with Ant Colony Optimization. T. Rough Sets 13: 240-259 (2011)

Hong Yu, Man Liu: A QoS-Aware Web Services Selection Model Using AND/OR Graph. ADMA (1) 2011: 124-137

Hong Yu, Tyler Trawick: Personalized Procedural Content Generation to Minimize Frustration and Boredom Based on Ranking Algorithm. AIIDE 2011

Hong Yu, Zhanguo Liu, Guoyin Wang: Automatically Determining the Number of Clusters Using Decision-Theoretic Rough Set. RSKT 2011: 504-513

Xiaohong Zhang, Yiyu Yao, Hong Yu: Rough implication operator based on strong topological rough algebras. Inf. Sci. 180(19): 3764-3780 (2010)

Zuofeng Li, Feifan Liu, Lamont D. Antieau, Yonggang Cao, Hong Yu: Lancet: a high precision medication event extraction system for clinical text. JAMIA 17(5): 563-567 (2010)

Shashank Agarwal, Hong Yu: Biomedical negation scope detection with conditional random fields. JAMIA 17(6): 696-701 (2010)

Shashank Agarwal, Hong Yu: Detecting hedge cues and their scope in biomedical text with conditional random fields. Journal of Biomedical Informatics 43(6): 953-961 (2010)

Yonggang Cao, James J. Cimino, John W. Ely, Hong Yu: Automatically extracting information needs from complex clinical questions. Journal of Biomedical Informatics 43(6): 962-971 (2010)

Yonggang Cao, Zuofeng Li, Feifan Liu, Shashank Agarwal, Qing Zhang, Hong Yu: An IR-Aided Machine Learning Framework for the BioCreative II.5 Challenge. IEEE/ACM Trans. Comput. Biology Bioinform. 7(3): 454-461 (2010)

Hong Yu, Shuangshuang Chu, Dachun Yang: A semiautonomous clustering algorithm based on decision-theoretic rough set theory. IEEE ICCI 2010: 477-483

Hong Yu, Hu Luo, Shuangshuang Chu: Web Users Access Paths Clustering Based on Possibilistic and Fuzzy Sets Theory. ADMA (1) 2010: 12-23

Tengfei Bao, Chongshi Gu, Zhongru Wu, Hong Yu: Analysis of crack stability in concrete dams with chaos optimized neural network. ICNC 2010: 1542-1545

Hong Yu, Shuangshuang Chu, Dachun Yang: Autonomous Knowledge-Oriented Clustering Using Decision-Theoretic Rough Set Theory. RSKT 2010: 687-694

Shashank Agarwal, Hong Yu: Automatically classifying sentences in full-text biomedical articles into Introduction, Methods, Results and Discussion. Bioinformatics 25(23): 3174-3180 (2009)

Jia-Hong Zhang, Qing-An Huang, Hong Yu: Effect of temperature and elastic constant correction on piezoresistivity of silicon nanobeams. NEMS 2009: 164-167

Hong Yu, Hu Luo: A Novel Possibilistic Fuzzy Leader Clustering Algorithm. RSFDGrC 2009: 423-430

Yanping Gao, Hong Yu, Xinzhong Cui, Yi Xie: Implementation of a new algorithm for the various pattern and language in the Workflow Management System. IEEE Congress on Evolutionary Computation 2008: 2278-2282

Huaqun Wang, Hong Yu: Cryptanalysis of Two Ring Signcryption Schemes. Inscrypt 2008: 41-46

Hong Yu, Xiaoliang Yang, Xianchao Zhang, Yuansheng Yang: An Improved Random Walk Algorithm Based on Correlation Coefficient to Find Scientific Communities. CSSE (1) 2008: 690-693

Xianchao Zhang, Xinxin Fan, Xinyue Liu, Hong Yu: A Ranking Algorithm via Changing Markov Probability Matrix Based on Distribution Factor. FSKD (5) 2008: 3-7

Srivatsan Pallavaram, Pierre-François D'Haese, Chris Kao, Hong Yu, Michael S. Remple, Joseph S. Neimat, Peter E. Konrad, Benoit M. Dawant: A New Method for Creating Electrophysiological Maps for DBS Surgery and Their Application to Surgical Guidance. MICCAI (1) 2008: 670-677

K. Bretonnel Cohen, Hong Yu, Philip E. Bourne, Lynette Hirschman: Session Introduction. Pacific Symposium on Biocomputing 2008: 551-555

Hui Chen, Hong Yu, Aiqun Long: A New Camera Calibration Algorithm Based on Rotating Object. RobVis 2008: 403-411

Hong Yu, Guoyin Wang, Fakuan Lan: Solving the Attribute Reduction Problem with Ant Colony Optimization. RSCTC 2008: 242-251

Yanping Gao, Hong Yu, Fengjiao Jiang: Design and Implementation of the Network Server Based on SIP Communication Protocol. WKDD 2008: 485-488

Pierre Zweigenbaum, Dina Demner-Fushman, Hong Yu, Kevin B. Cohen: Frontiers of biomedical text mining: current progress. Briefings in Bioinformatics 8(5): 358-375 (2007)

Jing Zhao, Guohui Ding, Lin Tao, Hong Yu, Zhong-Hao Yu, Jianhua Luo, Zhi-Wei Cao, Yi-Xue Li: Modular co-evolution of metabolic networks. BMC Bioinformatics 8 (2007)

Zhangcai Huang, Yasuaki Inoue, Hong Yu, Jun Pan, Yun Yang, Quan Zhang, Shuai Fang: Behavioral Circuit Macromodeling and Analog LSI Implementation for Automobile Engine Intake System. IEICE Transactions 90-A(4): 732-740 (2007)

Hong Yu, Yasuaki Inoue, Kazutoshi Sako, Xiaochuan Hu, Zhangcai Huang: An Effective SPICE3 Implementation of the Compound Element Pseudo-Transient Algorithm. IEICE Transactions 90-A(10): 2124-2131 (2007)

Hong Yu, Won Kim, Vasileios Hatzivassiloglou, W. John Wilbur: Using MEDLINE as a knowledge source for disambiguating abbreviations and acronyms in full-text biomedical journal articles. Journal of Biomedical Informatics 40(2): 150-159 (2007)

Hong Yu, Minsuk Lee, David R. Kaufman, John W. Ely, Jerome A. Osheroff, George Hripcsak, James J. Cimino: Development, implementation, and a cognitive evaluation of a definitional question answering system for physicians. Journal of Biomedical Informatics 40(3): 236-251 (2007)

P. Karina Tulipano, Ying Tao, William S. Millar, Pat Zanzonico, Katherine Kolbert, Hua Xu, Hong Yu, Lifeng Chen, Yves A. Lussier, Carol Friedman: Natural language processing and visualization in the molecular imaging domain. Journal of Biomedical Informatics 40(3): 270-281 (2007)

Zhangcai Huang, Hong Yu, Atsushi Kurokawa, Yasuaki Inoue: Modeling the Overshooting Effect for CMOS Inverter in Nanometer Technologies. ASP-DAC 2007: 565-570

Li-Chen Shi, Hong Yu, Bao-Liang Lu: Semi-Supervised Clustering for Vigilance Analysis Based on EEG. IJCNN 2007: 1518-1523

Xianchao Zhang, Hong Yu, Cong Zhang, Xinyue Liu: An Improved Weighted HITS Algorithm Based on Similarity and Popularity. IMSCCS 2007: 477-480

Xianchao Zhang, He Jiang, Xinyue Liu, Hong Yu: A Clustering Algorithm Based on Mechanics. PAKDD 2007: 367-378

Pierre Zweigenbaum, Dina Demner-Fushman, Hong Yu, K. Bretonnel Cohen: Session Introduction. Pacific Symposium on Biocomputing 2007: 205-208

Hong Yu, David Kaufman: A Cognitive Evaluation of Four Online Search Engines for Answering Definitional Questions Posed by Physicians. Pacific Symposium on Biocomputing 2007: 328-339

Minsuk Lee, Weiqing Wang, Hong Yu: Exploring supervised and unsupervised methods to detect topics in biomedical text. BMC Bioinformatics 7: 140 (2006)

Jing Zhao, Hong Yu, Jianhua Luo, Zhi-Wei Cao, Yi-Xue Li: Hierarchical modularity of nested bow-ties in metabolic networks. BMC Bioinformatics 7: 386 (2006)

Zhangcai Huang, Atsushi Kurokawa, Yun Yang, Hong Yu, Yasuaki Inoue: Modeling the Influence of Input-to-Output Coupling Capacitance on CMOS Inverter Delay. IEICE Transactions 89-A(4): 840-846 (2006)

Hong Yu, Yasuaki Inoue, Yuki Matsuya, Zhangcai Huang: An Effective Pseudo-Transient Algorithm for Finding Dc Solutions of Nonlinear Circuits. IEICE Transactions 89-A(10): 2724-2731 (2006)

Hong Yu, Won Kim, Vasileios Hatzivassiloglou, W. John Wilbur: A large scale, corpus-based approach for automatically disambiguating biomedical abbreviations. ACM Trans. Inf. Syst. 24(3): 380-404 (2006)

Zhangcai Huang, Yasuaki Inoue, Hong Yu, Quan Zhang: A Wide Dynamic Range Four-Quadrant CMOS Analog Multiplier Using Active Feedback. APCCAS 2006: 708-711

Hong Yu, Yasuaki Inoue, Yuki Matsuya, Zhangcai Huang: An effective pseudo-transient algorithm for finding DC operating points of nonlinear circuits. ISCAS 2006

Hong Yu, Minsuk Lee: Accessing bioscience images from abstract sentences. ISMB (Supplement of Bioinformatics) 2006: 547-556

Hong Yu, Minsuk Lee: BioEx: A Novel User-Interface that Accesses Images from Abstract Sentences. HLT-NAACL 2006

Pierre-François D'Haese, Srivatsan Pallavaram, Hong Yu, John Spooner, Peter E. Konrad, Benoit M. Dawant: Deformable Physiological Atlas-Based Programming of Deep Brain Stimulators: A Feasibility Study. WBIR 2006: 144-150

Andrey Rzhetsky, Ivan Iossifov, Tomohiro Koike, Michael Krauthammer, Pauline Kra, Mitzi Morris, Hong Yu, Pablo Ariel Duboué, Wubin Weng, W. John Wilbur: GeneWays: a system for extracting, analyzing, visualizing, and integrating molecular pathway data. Journal of Biomedical Informatics 37(1): 43-53 (2004)

Baisheng Shi, Zongtian Liu, Yuqing Wang, Hong Yu, Meili Huang: The Lattice Approach to Ontology Language Interoperability. CIT 2004: 265-272

Hong Yu, Won Kim, Vasileios Hatzivassiloglou, W. John Wilbur: Using MEDLINE as a Knowledge Source for Disambiguating Abbreviations in Full-Text Biomedical Journal Articles. CBMS 2004: 27-

Hong Yu, Xiu-Kun Wang, Jian Ying Zhang: Graph-Based Cyclic Multi-join Query Optimization Algorithm. WAIM 2004: 745-750

Hong Yu, Eugene Agichtein: Extracting synonymous gene and protein terms from biological literature. ISMB (Supplement of Bioinformatics) 2003: 340-349

Hong Yu, George Hripcsak, Carol Friedman: Research Paper: Mapping Abbreviations to Full Forms in Biomedical Articles. JAMIA 9(3): 262-272 (2002)

Hong Yu, Vasileios Hatzivassiloglou, Andrey Rzhetsky, W. John Wilbur: Automatically identifying gene/protein terms in MEDLINE abstracts. Journal of Biomedical Informatics 35(5-6): 322-330 (2002)

Sameer S. Pradhan, Valerie Krugler, Steven Bethard, Wayne Ward, Daniel Jurafsky, James H. Martin, Sasha Blair-Goldensohn, Andrew Hazen Schlaikjer, Elena Filatova, Pablo Ariel Duboué, Hong Yu, Rebecca J. Passonneau, Vasileios Hatzivassiloglou, Kathleen McKeown, Gabriel Illouz: Building a Foundation System for Producing Short Answers to Factual Questions. TREC 2002

Wenting Hou, Hong Yu, Xianlong Hong, Yici Cai, Weimin Wu, Jun Gu, William H. Kao: A new congestion-driven placement algorithm based on cell inflation. ASP-DAC 2001: 605-608

Andrey Rzhetsky, Michael Krauthammer, Tomohiro Koike, Pauline Kra, Shawn M. Gomez, Hong Yu, Pablo Ariel Duboué, Wubin Weng, Steven B. Johnson, Vasileios Hatzivassiloglou, Carol Friedman: GeneWays: A System for Mining Text and for Integrating Data on Molecular Pathways. German Conference on Bioinformatics 2001: 2-5

Carol Friedman, Pauline Kra, Hong Yu, Michael Krauthammer, Andrey Rzhetsky: GENIES: a natural-language processing system for the extraction of molecular pathways from journal articles. ISMB (Supplement of Bioinformatics) 2001: 74-82

Hong Yu, Xianlong Hong, Yici Cai: MMP: a novel placement algorithm for combined macro block and standard cell layout design. ASP-DAC 2000: 271-276

Hong Yu, Lauren Ernst, Marc Wagner, Alan Waggoner: Sensitive detection of RNAs in single cells by flow cytometry [published erratum appears in Nucleic Acids Res 1992 Oct 25;20(20): 5518]. Nucleic Acids Research 20(1): 83-88 (1992)