Jun Yu

Steve Kelling, Jeff Gerbracht, Daniel Fink, Carl Lagoze, Weng-Keen Wong, Jun Yu, Theodoros Damoulas, Carla P. Gomes: A Human/Computer Learning Network to Improve Biodiversity Conservation and Research. AI Magazine 34(1): 10-20 (2013)

Jun Yu: GPB at 10. Genomics, Proteomics & Bioinformatics 11(1): 1 (2013)

Zhang Zhang, Jun Yu: Does the Genetic Code Have A Eukaryotic Origin? Genomics, Proteomics & Bioinformatics 11(1): 41-55 (2013)

Yuli Li, Shuhui Song, Cuiping Li, Jun Yu: MeRIP-PF: An Easy-to-use Pipeline for High-resolution Peak-finding in MeRIP-Seq Data. Genomics, Proteomics & Bioinformatics 11(1): 72-75 (2013)

Dapeng Wang, Yan Xia, Xinna Li, Lixia Hou, Jun Yu: The Rice Genome Knowledgebase (RGKbase): an annotation database for rice comparative genomics and evolutionary biology. Nucleic Acids Research 41(Database-Issue): 1199-1205 (2013)

Jun Yu, Dacheng Tao, Yong Rui, Jun Cheng: Pairwise constraints based multiview features fusion for scene classification. Pattern Recognition 46(2): 483-496 (2013)

Jun Yu: Cartoon features selection using Diffusion Score. Signal Processing 93(6): 1510-1520 (2013)

Stephen M. Cox, Jun Yu, Wang Ling Goh, Meng Tong Tan: Intrinsic Distortion of a Fully Differential BD-Modulated Class-D Amplifier With Analog Feedback. IEEE Trans. on Circuits and Systems 60-I(1): 63-73 (2013)

Jun Yu, Zengfu Wang, Yang Cao: 2D/3D Model-Based Facial Video Coding/Decoding at Ultra-Low Bit-Rate. MMM (2) 2013: 12-23

Yongbing Zhao, Jiayan Wu, Junhui Yang, Shixiang Sun, Jing-Fa Xiao, Jun Yu: PGAP: pan-genomes analysis pipeline. Bioinformatics 28(3): 416-418 (2012)

Zhang Zhang, Jun Li, Peng Cui, Feng Ding, Ang Li, Jeffrey P. Townsend, Jun Yu: Codon Deviation Coefficient: a novel measure for estimating codon usage bias and its statistical significance. BMC Bioinformatics 13: 43 (2012)

Jingfa Liu, Gang Li, Jun Yu, Yonglei Yao: Heuristic energy landscape paving for protein folding problem in the three-dimensional HP lattice model. Computational Biology and Chemistry 38: 17-26 (2012)

Jun Yu: Genomics, Proteomics & Bioinformatics (GPB) Has a New Start - Open Access. Genomics, Proteomics & Bioinformatics 10(1): 1-3 (2012)

Peng Cui, Feng Ding, Qiang Lin, Lingfang Zhang, Ang Li, Zhang Zhang, Songnian Hu, Jun Yu: Distinct Contributions of Replication and Transcription to Mutation Rate Variation of Human Genomes. Genomics, Proteomics & Bioinformatics 10(1): 4-10 (2012)

Peng Cui, Qiang Lin, Feng Ding, Songnian Hu, Jun Yu: The Transcript-centric Mutations in Human Genomes. Genomics, Proteomics & Bioinformatics 10(1): 11-22 (2012)

Jun Yu: Challenges to the Common Dogma. Genomics, Proteomics & Bioinformatics 10(2): 55-57 (2012)

Peng Cui, Wanfei Liu, Yuhui Zhao, Qiang Lin, Feng Ding, Chengqi Xin, Jianing Geng, Shuhui Song, Fanglin Sun, Songnian Hu, Jun Yu: The Association Between H3K4me3 and Antisense Transcription. Genomics, Proteomics & Bioinformatics 10(2): 74-81 (2012)

Peng Cui, Wanfei Liu, Yuhui Zhao, Qiang Lin, Daoyong Zhang, Feng Ding, Chengqi Xin, Zhang Zhang, Shuhui Song, Fanglin Sun, Jun Yu, Songnian Hu: Comparative Analyses of H3K4 and H3K27 Trimethylations Between the Mouse Cerebrum and Testis. Genomics, Proteomics & Bioinformatics 10(2): 82-93 (2012)

Jun Yu: Life on Two Tracks. Genomics, Proteomics & Bioinformatics 10(3): 123-126 (2012)

Zhang Zhang, Jun Yu: The Pendulum Model for Genome Compositional Dynamics: from the Four Nucleotides to the Twenty Amino Acids. Genomics, Proteomics & Bioinformatics 10(4): 175-180 (2012)

Hao Wu, Hongzhu Qu, Ning Wan, Zhang Zhang, Songnian Hu, Jun Yu: Strand-biased Gene Distribution in Bacteria Is Related to both Horizontal Gene Transfer and Strand-biased Nucleotide Composition. Genomics, Proteomics & Bioinformatics 10(4): 186-196 (2012)

Lina Ma, Linghu Nie, Jing Liu, Bing Zhang, Shuhui Song, Min Sun, Jin Yang, Yadong Yang, Xiangdong Fang, Songnian Hu, Yongliang Zhao, Jun Yu: An RNA-seq-based Gene Expression Profiling of Radiation-induced Tumorigenic Mammary Epithelial Cells. Genomics, Proteomics & Bioinformatics 10(6): 326-335 (2012)

Guoxiang Yu, Jun Yu: Perturbed Behavior for the Model of wave Propagation in a nonlinear dispersive Nonconservative Media. I. J. Bifurcation and Chaos 22(8) (2012)

Jun Yu, Wei Bian, Mingli Song, Jun Cheng, Dacheng Tao: Graph based transductive learning for cartoon correspondence construction. Neurocomputing 79: 105-114 (2012)

Hong Zhang, Jun Yu, Meng Wang, Yun Liu: Semi-supervised distance metric learning based on local linear regression for data clustering. Neurocomputing 93: 100-105 (2012)

Jun Yu, Feng Lin, Hock Soon Seah, Cuihua Li, Ziyu Lin: Image classification by multimodal subspace learning. Pattern Recognition Letters 33(9): 1196-1204 (2012)

Jun Yu, Jun Cheng, Dacheng Tao: Interactive cartoon reusing by transfer learning. Signal Processing 92(9): 2147-2158 (2012)

Jun Yu, Meng Tong Tan, Wang Ling Goh, Stephen M. Cox: A Dual-Feedforward Carrier-Modulated Second-Order Class-D Amplifier With Improved THD. IEEE Trans. on Circuits and Systems 59-II(1): 35-39 (2012)

Jun Yu, Wang Ling Goh, Muthukumaraswamy Annamalai Arasu, Minkyu Je: A 60-V, $>\hbox{225}\ ^{\circ}\hbox{C}$ Half-Bridge Driver for Piezoelectric Acoustic Transducer, on SOI CMOS. IEEE Trans. on Circuits and Systems 59-II(11): 771-775 (2012)

Jun Yu, Dacheng Tao, Meng Wang: Adaptive Hypergraph Learning and its Application in Image Classification. IEEE Transactions on Image Processing 21(7): 3262-3272 (2012)

Jun Yu, Meng Wang, Dacheng Tao: Semisupervised Multiview Distance Metric Learning for Cartoon Synthesis. IEEE Transactions on Image Processing 21(11): 4636-4648 (2012)

Jun Yu, Dongquan Liu, Dacheng Tao, Hock Soon Seah: On Combining Multiple Features for Cartoon Character Retrieval and Clip Synthesis. IEEE Transactions on Systems, Man, and Cybernetics, Part B 42(5): 1413-1427 (2012)

Ratchadaporn Kanawong, Tayo Obafemi-Ajayi, Jun Yu, Dong Xu, Shao Li, Ye Duan: ZHENG classification in Traditional Chinese Medicine based on modified specular-free tongue images. BIBM Workshops 2012: 288-294

Jun Yu, Steve Kelling, Jeff Gerbracht, Weng-Keen Wong: Automated data verification in a large-scale citizen science project: A case study. eScience 2012: 1-8

Steve Kelling, Jeff Gerbracht, Daniel Fink, Carl Lagoze, Weng-Keen Wong, Jun Yu, Theodoros Damoulas, Carla P. Gomes: eBird: A Human/Computer Learning Network for Biodiversity Conservation and Research. IAAI 2012

Jun Yu, Jun Cheng, Jianmin Wang, Dacheng Tao: Transductive Cartoon Retrieval by Multiple Hypergraph Learning. ICONIP (3) 2012: 269-276

Dongquan Liu, Quan Chen, Jun Yu, Huiqin Gu, Dacheng Tao, Hock Soon Seah: Stroke Correspondence Construction Using Manifold Learning. Comput. Graph. Forum 30(8): 2194-2207 (2011)

Peng Liu, Bai-Jun Teng, Shu-Bin Zhang, Xiao-Hui Su, Jun Yu, Shou-Jun Liu: IDD Info: A software to manage surveillance data of Iodine Deficiency Disorders. Computer Methods and Programs in Biomedicine 103(2): 87-96 (2011)

Zhang Zhang, Jun Yu: On the Organizational Dynamics of the Genetic Code. Genomics, Proteomics & Bioinformatics 9(1-2): 21-29 (2011)

Tongwu Zhang, Yingfeng Luo, Kan Liu, Linlin Pan, Bing Zhang, Jun Yu, Songnian Hu: BIGpre: A Quality Assessment Package for Next-Generation Sequencing Data. Genomics, Proteomics & Bioinformatics 9(6): 238-244 (2011)

Jianhua Yan, Jun Yu: Emission image reconstruction based on incremental optimisation transfer algorithm. IJCSE 6(3): 146-150 (2011)

Jun Yu, Hock Soon Seah: Fuzzy Diffusion Distance Learning for Cartoon Similarity Estimation. J. Comput. Sci. Technol. 26(2): 203-216 (2011)

Jun Yu, Dacheng Tao, Meng Wang, Jun Cheng: Semi-automatic cartoon generation by motion planning. Multimedia Syst. 17(5): 409-419 (2011)

Jun Yu, Hock Soon Seah, Yueting Zhuang: Cartoon synthesis using constrained spreading activation network. Multimedia Tools Appl. 51(3): 1147-1174 (2011)

Stephen M. Cox, Meng Tong Tan, Jun Yu: A Second-Order Class-D Audio Amplifier. SIAM Journal of Applied Mathematics 71(1): 270-287 (2011)

Jun Yu, Dongquan Liu, Dacheng Tao, Hock Soon Seah: Complex Object Correspondence Construction in Two-Dimensional Animation. IEEE Transactions on Image Processing 20(11): 3257-3269 (2011)

Steve Kelling, Jun Yu, Jeff Gerbracht, Weng-Keen Wong: Emergent Filters: Automated Data Verification in a Large-Scale Citizen Science Project. e-Science Workshops 2011: 20-27

Dongyu Zhao, Yan Wang, Di Luo, Xiaohu Shi, Liupu Wang, Dong Xu, Jun Yu, Yanchun Liang: PMirP: A pre-microRNA prediction method based on structure-sequence hybrid features. Artificial Intelligence in Medicine 49(2): 127-132 (2010)

Louise Nielsen, Claire Heffernan, Yibo Lin, Jun Yu: The Daktari: An interactive, multi-media tool for knowledge transfer among poor livestock keepers in Kenya. Computers & Education 54(4): 1241-1247 (2010)

Dapeng Wang, Yubin Zhang, Zhang Zhang, Jiang Zhu, Jun Yu: KaKs_Calculator 2.0: A Toolkit Incorporating Gamma-Series Methods and Sliding Window Strategies. Genomics, Proteomics & Bioinformatics 8(1): 77-80 (2010)

Ximiao He, Shu Tao, Jing Jin, Songnian Hu, Jun Yu: The Most Redundant Sequences in Human CpG Island Library Are Derived from Mitochondrial Genome. Genomics, Proteomics & Bioinformatics 8(2): 81-91 (2010)

Kaifu Chen, Lei Wang, Meng Yang, Jiucheng Liu, Chengqi Xin, Songnian Hu, Jun Yu: Sequence Signatures of Nucleosome Positioning in Caenorhabditis elegans. Genomics, Proteomics & Bioinformatics 8(2): 92-102 (2010)

Jun Wang, Jianguo Zhang, Ruiqiang Li, Hongkun Zheng, Jun Li, Yong Zhang, Heng Li, Peixiang Ni, Songgang Li, Shengting Li, Jingqiang Wang, Dongyuan Liu, Jason E. McDermott, Ram Samudrala, Siqi Liu, Jian Wang, Huanming Yang, Jun Yu, Gane Ka-Shu Wong: Evolutionary Transients in the Rice Transcriptome. Genomics, Proteomics & Bioinformatics 8(4): 211-228 (2010)

Wanfei Liu, Dawei Huang, Kan Liu, Songnian Hu, Jun Yu, Gang Gao, Shuhui Song: Discovery, Identification and Comparative Analysis of Non-Specific Lipid Transfer Protein (nsLtp) Family in Solanaceae. Genomics, Proteomics & Bioinformatics 8(4): 229-237 (2010)

Jun Yu, Dongquan Liu, Hock Soon Seah: Transductive graph based cartoon synthesis. Journal of Visualization and Computer Animation 21(3-4): 277-288 (2010)

Yi Yang, Yueting Zhuang, Dacheng Tao, Dong Xu, Jun Yu, Jiebo Luo: Recognizing Cartoon Image Gestures for Retrieval and Interactive Cartoon Clip Synthesis. IEEE Trans. Circuits Syst. Video Techn. 20(12): 1745-1756 (2010)

Yingjie Tian, Jun Yu, Wenjing Chen: lp-norm support vector machine with CCCP. FSKD 2010: 1560-1564

Jun Yu, Weng-Keen Wong, Rebecca A. Hutchinson: Modeling Experts and Novices in Citizen Science Data for Species Distribution Modeling. ICDM 2010: 1157-1162

Scott Craver, Jun Yu: Subset selection circumvents the square root law. Media Forensics and Security 2010: 754103

Janardhan Rao Doppa, Jun Yu, Prasad Tadepalli, Lise Getoor: Learning Algorithms for Link Prediction Based on Chance Constraints. ECML/PKDD (1) 2010: 344-360

Jun Yu, Laura K. Gross, Christopher M. Danforth: Complex dynamic behavior during transition in a solid combustion model. Complexity 14(6): 9-14 (2009)

Guoqiang Zhang, Lingxia Zhang, Mingcheng Zhang, Linlin Pan, Fengyu Wang, Jun Huang, Guoli Li, Jun Yu, Songnian Hu: Screening and Assessing 11 Mycobacterium tuberculosis Proteins as Potential Serodiagnostical Markers for Discriminating TB Patients from BCG Vaccinees. Genomics, Proteomics & Bioinformatics 7(3): 107-115 (2009)

Dapeng Wang, Song Zhang, Fuhong He, Jiang Zhu, Songnian Hu, Jun Yu: How Do Variable Substitution Rates Influence Ka and Ks Calculations? Genomics, Proteomics & Bioinformatics 7(3): 116-127 (2009)

Yimei Cai, Xiaomin Yu, Songnian Hu, Jun Yu: A Brief Review on the Mechanisms of miRNA Regulation. Genomics, Proteomics & Bioinformatics 7(4): 147-154 (2009)

Suyuan Bai, Zhenan Tang, Zhengxing Huang, Jun Yu: Thermal Characterization of ħbox Si₃ħbox N₄ Thin Films Using Transient Thermoreflectance Technique. IEEE Transactions on Industrial Electronics 56(8): 3238-3243 (2009)

Xiaofei Zhang, Gaopeng Feng, Jun Yu, Dazhuan Xu: Angle-Frequency Estimation Using Trilinear Decomposition of the Oversampled Output. Wireless Personal Communications 51(2): 365-373 (2009)

Jun Yu, Claire Heffernan: Livestock, learning and diagnostics: New directions in veterinary tele-medicine. ICTD 2009: 489

Lisha Sun, Jun Yu, Patch Beadle: A Novel Method for Analyzing Dynamic Complexity of EEG Signals Using Symbolic Entropy Measurement. ISNN (3) 2009: 530-537

Scott Craver, Enping Li, Jun Yu: Protocols for data hiding in pseudo-random state. Media Forensics and Security 2009: 72540

Jun Yu, Ling Chen, Gencai Chen: Fuzzy priority based overlay multicast. Computer Communications 31(10): 1919-1933 (2008)

Weiwei Wang, Qibin Luo, Haiyan Guo, Peter Bossier, Gilbert Van Stappen, Patrick Sorgeloos, Naihong Xin, Qishi Sun, Songnian Hu, Jun Yu: Phylogenetic Analysis of Brine Shrimp (Artemia) in China Using DNA Barcoding. Genomics, Proteomics & Bioinformatics 6(3-4): 155-162 (2008)

Jun Yu, Zhiliang Wang, Lun Xie, Yongxiang Xia, Xiangjie Qiao: Research on Artificial Psychology Based on Multimodal Interactive Service Robot. IJVR 7(2): 33-40 (2008)

Yueting Zhuang, Jun Yu, Jun Xiao, Cheng Chen: Perspective-aware cartoon clips synthesis. Journal of Visualization and Computer Animation 19(3-4): 355-364 (2008)

Jian Yang, Lihong Chen, Lilian Sun, Jun Yu, Qi Jin: VFDB 2008 release: an enhanced web-based resource for comparative pathogenomics. Nucleic Acids Research 36(Database-Issue): 539-542 (2008)

Liping Wei, Jun Yu: Bioinformatics in China: A Personal Perspective. PLoS Computational Biology 4(4) (2008)

Jianjun Chen, Xianqing Luo, Jun Wang, Honghua Liao, Wenli Zhou, Ling Zhang, Heyou Han, Jun Yu: Theoretical Analysis of T-lymphocytes Electroporation Model. BMEI (2) 2008: 688-690

Jun Yu, Zhi-yi Hu: Using Formal Methods to Design a Class Scheduling System. CSSE (2) 2008: 56-59

Honghua Liao, Jun Yu, Jun Wang, Jianjun Chen, Yu Liao, Jinqiao Yi: A System Platform Design of Travelling Wave Dielectrophoresis Microchip Based on SOPC. CSSE (4) 2008: 66-69

Honghua Liao, Jun Yu, Jun Wang, Jianjun Chen, Yu Liao, Jinqiao Yi: A Control and Acquisition System Design of Low-voltage Electrophoresis MicroChip Based on SOPC and DDS. ICESS 2008: 251-257

Jieru Chi, Guowei Yang, Yongtao Zhao, Huabo Liu, Jun Yu: On the use of the coulostatic method for the study of intelligent remote corrosion monitoring system. ICNSC 2008: 1233-1237

Jun Yu, Jieru Chi, Xiaodong Zhuang: A New Wavelet-based Robust Watermarking for Digital Image. ICNSC 2008: 1391-1394

Scott Craver, Enping Li, Jun Yu, Idris M. Atakli: A Supraliminal Channel in a Videoconferencing Application. Information Hiding 2008: 283-293

Jun Yu, Bin Xu: A Framework for Seamless Integration of Legacy Business Applications into Enterprise Business Intelligent System. ISECS 2008: 612-616

Jun Yu, Lun Xie, Zhiliang Wang, Yongxiang Xia: An Affective Model Applied in Playmate Robot for Children. ISNN (2) 2008: 158-164

Scott Craver, Idris M. Atakli, Jun Yu: Reverse-Engineering a Watermark Detector Using an Oracle. EURASIP J. Information Security 2007 (2007)

Jun Yu: A Content-Centric Organization of the Genetic Code. Genomics, Proteomics & Bioinformatics 5(1): 1-6 (2007)

Jing-Fa Xiao, Jun Yu: A Scenario on the Stepwise Evolution of the Genetic Code. Genomics, Proteomics & Bioinformatics 5(3-4): 143-151 (2007)

Jun Yu, Yueting Zhuang, Jun Xiao, Cheng Chen: Adaptive control in cartoon data reusing. Journal of Visualization and Computer Animation 18(4-5): 571-582 (2007)

Suhua Chang, Jiajie Zhang, Xiaoyun Liao, Xinxing Zhu, Dahai Wang, Jiang Zhu, Tao Feng, Baoli Zhu, George F. Gao, Jian Wang, Huanming Yang, Jun Yu, Jing Wang: Influenza Virus Database (IVDB): an integrated information resource and analysis platform for influenza virus research. Nucleic Acids Research 35(Database-Issue): 376-380 (2007)

Jun Yu, Bin Xu, Hua Hu: Towards Capability Maturity in Software Review. COMPSAC (1) 2007: 629-630

Qazi S. M. Zia-ul-Haque, Zhiliang Wang, Cunyang Li, Juan Wang, Jun Yu: A Robot that learns and teaches english language to native Chinese children. ROBIO 2007: 1087-1092

Jun Yu, Zhenlin Yang, Xibin Zhang: A class of nonlinear stochastic volatility models and its implications for pricing currency options. Computational Statistics & Data Analysis 51(4): 2218-2231 (2006)

Liwei Liu, Jun Yu, Zhi Guo: A kind of stochastic duel model for guerrilla war. European Journal of Operational Research 171(2): 430-438 (2006)

Zhang Zhang, Jun Yu: Evaluation of Six Methods for Estimating Synonymous and Nonsynonymous Substitution Rates. Genomics, Proteomics & Bioinformatics 4(3): 173-181 (2006)

Xiao-Qian Zhao, Jian-Fei Hu, Jun Yu: Comparative Analysis of Eubacterial DNA Polymerase III Alpha Subunits. Genomics, Proteomics & Bioinformatics 4(4): 203-211 (2006)

Zhang Zhang, Jun Li, Xiao-Qian Zhao, Jun Wang, Gane Ka-Shu Wong, Jun Yu: KaKs_Calculator: Calculating Ka and Ks Through Model Selection and Model Averaging. Genomics, Proteomics & Bioinformatics 4(4): 259-263 (2006)

Nils Östlund, Jun Yu, Stefan Karlsson: Adaptive spatio-temporal filtering of multichannel surface EMG signals. Med. Biol. Engineering and Computing 44(3): 209-215 (2006)

Jian Yang, Lihong Chen, Jun Yu, Lilian Sun, Qi Jin: ShiBASE: an integrated database for comparative genomics of Shigella. Nucleic Acids Research 34(Database-Issue): 398-401 (2006)

Jun Yu, Ling Chen, Gencai Chen: Priority based Overlay Multicast with Filtering Mechanism for Distributed Interactive Applications. DS-RT 2006: 127-134

Guiyi Wei, Jun Yu, Hanxiao Shi, Yun Ling: A Semantic-Driven Cache Management Approach for Mobile Applications. International Conference on Computational Science (3) 2006: 184-191

Guiyi Wei, Jun Yu, Yun Ling, Jun Liu: Design and Implementation of an Ontology Algorithm for Web Documents Classification. ICCSA (4) 2006: 649-658

Jianhua Yan, Jun Yu: A Nonlinear Variational Model for PET Reconstruction. ICPR (4) 2006: 699-702

Jianhua Yan, Jun Yu: Emission Image Reconstruction Based on Incremental Optimization Transfer Algorithm. IMSCCS (2) 2006: 266-269

Jun Yu, Ling Chen, Gencai Chen: Priority Based Overlay Multicast for Distributed Interactive Applications. ISCC 2006: 703-708

Jun Yu, Zhenlin Yang: A Class of Nonlinear Stochastic Volatility Models. JCIS 2006

Lihong Chen, Jian Yang, Jun Yu, Zhijian Yao, Lilian Sun, Yan Shen, Qi Jin: VFDB: a reference database for bacterial virulence factors. Nucleic Acids Research 33(Database-Issue): 325-328 (2005)

Jing Wang, Qingyou Xia, Ximiao He, Mingtao Dai, Jue Ruan, Jie Chen, Guo Yu, Haifeng Yuan, Yafeng Hu, Ruiqiang Li, Tao Feng, Chen Ye, Cheng Lu, Jun Wang, Songgang Li, Gane Ka-Shu Wong, Huanming Yang, Jian Wang, Zhonghuai Xiang, Zeyang Zhou, Jun Yu: SilkDB: a knowledgebase for silkworm biology and genomics. Nucleic Acids Research 33(Database-Issue): 399-402 (2005)

Jing Wang, Ximiao He, Jue Ruan, Mingtao Dai, Jie Chen, Yong Zhang, Yafeng Hu, Chen Ye, Shengting Li, Lijuan Cong, Lin Fang, Bin Liu, Songgang Li, Jian Wang, David W. Burt, Gane Ka-Shu Wong, Jun Yu, Huanming Yang, Jun Wang: ChickVD: a sequence variation database for the chicken genome. Nucleic Acids Research 33(Database-Issue): 438-441 (2005)

Ruiqiang Li, Jia Ye, Songgang Li, Jing Wang, Yujun Han, Chen Ye, Jian Wang, Huanming Yang, Jun Yu, Gane Ka-Shu Wong, Jun Wang: ReAS: Recovery of Ancestral Sequences for Transposable Elements from the Unassembled Reads of a Whole Genome Shotgun. PLoS Computational Biology 1(4) (2005)

Come Raczy, Gary S. H. Tan, Jun Yu: A sort-based DDM matching algorithm for HLA. ACM Trans. Model. Comput. Simul. 15(1): 14-38 (2005)

Jun Yu, Ling Chen, Gencai Chen: A fuzzy grouping mechanism for distributed interactive simulation. ICC 2005: 881-885

Wenming Zhao, Jing Wang, Ximiao He, Xiaobing Huang, Yongzhi Jiao, Mingtao Dai, Shulin Wei, Jian Fu, Ye Chen, Xiaoyu Ren, Yong Zhang, Peixiang Ni, Jianguo Zhang, Songgang Li, Jian Wang, Gane Ka-Shu Wong, Hongyu Zhao, Jun Yu, Huanming Yang, Jun Wang: BGI-RIS: an integrated information resource and comparative analysis workbench for rice genomics. Nucleic Acids Research 32(Database-Issue): 377-382 (2004)

Nils Östlund, Jun Yu, Stefan Karlsson: Improved maximum frequency estimation with application to instantaneous mean frequency estimation of surface electromyography. IEEE Trans. Biomed. Engineering 51(9): 1541-1546 (2004)

Guangfen Wei, Zhenan Tang, Philip C. H. Chan, Jun Yu: A Blind Source Separation Based Micro Gas Sensor Array Modeling Method. ISNN (1) 2004: 696-701

Jun Yu, Magnus Ekström: Multispectral image classification using wavelets: a simulation study. Pattern Recognition 36(4): 889-898 (2003)

George F. Corliss, Jun Yu: Interval Testing Strategies Applied to COSY's Interval and Taylor Model Arithmetic. Numerical Software with Result Verification 2003: 91-106

Yap-Peng Tan, YongQing Liang, Jun Yu: Video transcoding for fast forward/reverse video playback. ICIP (1) 2002: 713-716

Jun Yu, Come Raczy, Gary S. H. Tan: Evaluation of a sort-based matching algorithm for DDM. PADS 2002: 68-75

Jun Yu, Mandyam D. Srinath: An efficient method for scene cut detection. Pattern Recognition Letters 22(13): 1379-1391 (2001)

Jianping Fan, Jun Yu, Gen Fujita, Takao Onoye, Lide Wu, Isao Shirakawa: Spatiotemporal segmentation for compact video representation. Sig. Proc.: Image Comm. 16(6): 553-566 (2001)

Stefan Karlsson, Jun Yu, Metin Akay: Time-frequency analysis of myoelectric signals during dynamic contractions: a comparative study. IEEE Trans. Biomed. Engineering 47(2): 228-238 (2000)

Fan Mo, Yihua Zhang, Jun Yu, Qianling Zhang: An algorithm for VLSI implementation of highly efficient cubic-polynomial evaluation. ASP-DAC 2000: 13-14

Zhiwu Xie, Jun Yu, Jinyang Liu: Applying UML to Gas Turbine Engine Simulation. TOOLS (31) 1999: 458-464