Alexander Zien

Marius Kloft, Ulf Brefeld, Sören Sonnenburg, Alexander Zien: l_p-Norm Multiple Kernel Learning. Journal of Machine Learning Research 12: 953-997 (2011)

Vojtech Franc, Alexander Zien, Bernhard Schölkopf: Support Vector Machines as Probabilistic Models. ICML 2011: 665-672

Sören Sonnenburg, Gunnar Rätsch, Sebastian Henschel, Christian Widmer, Jonas Behr, Alexander Zien, Fabio De Bona, Alexander Binder, Christian Gehl, Vojtech Franc: The SHOGUN Machine Learning Toolbox. Journal of Machine Learning Research 11: 1799-1802 (2010)

Marius Kloft, Ulf Brefeld, Sören Sonnenburg, Alexander Zien: Non-Sparse Regularization and Efficient Training with Multiple Kernels. CoRR abs/1003.0079 (2010)

Gabriele Schweikert, Jonas Behr, Alexander Zien, Georg Zeller, Cheng Soon Ong, Sören Sonnenburg, Gunnar Rätsch: mGene.web: a web service for accurate computational gene finding. Nucleic Acids Research 37(Web-Server-Issue): 312-316 (2009)

Marius Kloft, Ulf Brefeld, Sören Sonnenburg, Pavel Laskov, Klaus-Robert Müller, Alexander Zien: Efficient and Accurate Lp-Norm Multiple Kernel Learning. NIPS 2009: 997-1005

Alexander Zien, Nicole Krämer, Sören Sonnenburg, Gunnar Rätsch: The Feature Importance Ranking Measure. ECML/PKDD (2) 2009: 694-709

Sören Sonnenburg, Alexander Zien, Petra Philips, Gunnar Rätsch: POIMs: positional oligomer importance matrices - understanding support vector machine-based signal detectors. ISMB 2008: 6-14

Cheng Soon Ong, Alexander Zien: An Automated Combination of Kernels for Predicting Protein Subcellular Localization. WABI 2008: 186-197

Alexander Zien, Ulf Brefeld, Tobias Scheffer: Transductive support vector machines for structured variables. ICML 2007: 1183-1190

Alexander Zien, Cheng Soon Ong: Multiclass multiple kernel learning. ICML 2007: 1191-1198

Olivier Chapelle, Mingmin Chi, Alexander Zien: A continuation method for semi-supervised SVMs. ICML 2006: 185-192

Sören Sonnenburg, Alexander Zien, Gunnar Rätsch: ARTS: accurate recognition of transcription starts in human. ISMB (Supplement of Bioinformatics) 2006: 472-480

Alexander Zien, Joaquin Quiñonero Candela: Large margin non-linear embedding. ICML 2005: 1060-1067

Gökhan H. Bakir, Alexander Zien, Koji Tsuda: Learning to Find Graph Pre-images. DAGM-Symposium 2004: 253-261

Alexander Zien, Juliane Fluck, Ralf Zimmer, Thomas Lengauer: Microarrays: How Many Do You Need? Journal of Computational Biology 10(3/4): 653-667 (2003)

Jan Eichhorn, Andreas S. Tolias, Alexander Zien, Malte Kuss, Carl Edward Rasmussen, Jason Weston, Nikos K. Logothetis, Bernhard Schölkopf: Prediction on Spike Data Using Kernel Algorithms. NIPS 2003

Ingolf Sommer, Alexander Zien, Niklas von Öhsen, Ralf Zimmer, Thomas Lengauer: Confidence measures for protein fold recognition. Bioinformatics 18(6): 802-812 (2002)

Daniel Hanisch, Alexander Zien, Ralf Zimmer, Thomas Lengauer: Co-clustering of biological networks and gene expression data. ISMB 2002: 145-154

Alexander Zien, Juliane Fluck, Ralf Zimmer, Thomas Lengauer: Microarrays: how many do you need? RECOMB 2002: 321-330

Ingolf Sommer, Niklas von Öhsen, Alexander Zien, Ralf Zimmer, Thomas Lengauer: Confidence Measures for Fold Recognition. German Conference on Bioinformatics 2001: 26-33

Alexander Zien, Thomas Aigner, Ralf Zimmer, Thomas Lengauer: Centralization: a new method for the normalization of gene expression data. ISMB (Supplement of Bioinformatics) 2001: 323-331

Alexander Zien, Gunnar Rätsch, Sebastian Mika, Bernhard Schölkopf, Thomas Lengauer, Klaus-Robert Müller: Engineering support vector machine kernels that recognize translation initiation sites. Bioinformatics 16(9): 799-807 (2000)

Alexander Zien, Ralf Zimmer, Thomas Lengauer: A Simple Iterative Approach to Parameter Optimization. Journal of Computational Biology 7(3-4): 483-501 (2000)

Alexander Zien, Robert Küffner, Ralf Zimmer, Thomas Lengauer: Analysis of Gene Expression Data with Pathway Scores. ISMB 2000: 407-417

Alexander Zien, Ralf Zimmer, Thomas Lengauer: A simple iterative approach to parameter optimization. RECOMB 2000: 318-327

Alexander Zien, Gunnar Rätsch, Sebastian Mika, Bernhard Schölkopf, Christian Lemmen, Alex J. Smola, Thomas Lengauer, Klaus-Robert Müller: Engineering Support Vector Machine Kerneis That Recognize Translation Initialion Sites. German Conference on Bioinformatics 1999: 37-43

Christian Lemmen, Alexander Zien, Ralf Zimmer, Thomas Lengauer: Application of Parameter Optimization to Molecular Comparison Problems. Pacific Symposium on Biocomputing 1999: 482-493